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OPENSEQ.org
L23 - S07
UniProt: Q5SHP0 - P17291
Length: 252
Sequences: 1360
Seq/Len: 5.48
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dX 3v2eG 3v2fXContact Map
2j002j00G 2j01X 2j02G 2j03XContact Map
4juw4juwG 4juxXContact Map
4kix4kixT 4kiyG 4kizT 4kj0G 4kj1T 4kj2G 4kj3T 4kj4GContact Map
4kj54kj5T 4kj6G 4kj7T 4kj8G 4kj9T 4kjaG 4kjbT 4kjcGContact Map
3knh3knhG 3kniX 3knjG 3knkXContact Map
3ohc3ohcG 3ohdG 3ohjX 3ohkXContact Map
3uz63uz6J 3uz7J 3uz8T 3uz9TContact Map
3oge3ogeG 3ogyG 3oh5X 3oh7XContact Map
3uyd3uydJ 3uyeT 3uyfJ 3uygTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
47_F 139_E 1.00 0.03
55_N 149_R 0.87 0.02
16_K 53_K 0.86 0.02
81_V 65_A 0.86 0.02
75_D 12_L 0.83 0.02
77_K 37_N 0.82 0.02
10_A 47_C 0.80 0.01
46_A 76_R 0.80 0.01
93_E 70_K 0.80 0.01
34_A 125_M 0.79 0.01
91_A 100_A 0.79 0.01
26_Y 131_K 0.78 0.01
74_P 76_R 0.77 0.01
64_K 36_K 0.76 0.01
8_I 97_Q 0.75 0.01
46_A 4_R 0.74 0.01
72_K 143_R 0.73 0.01
64_K 110_Q 0.73 0.01
63_K 76_R 0.72 0.01
23_E 146_E 0.72 0.01
82_Q 149_R 0.72 0.01
34_A 143_R 0.71 0.01
90_E 77_S 0.71 0.01
9_L 130_G 0.70 0.01
88_K 143_R 0.70 0.01
50_K 137_K 0.70 0.01
21_F 154_Y 0.69 0.01
62_K 89_M 0.68 0.01
37_T 107_A 0.67 0.01
73_R 113_E 0.67 0.01
70_L 20_D 0.67 0.01
81_V 84_N 0.66 0.01
22_A 4_R 0.66 0.01
73_R 149_R 0.65 0.01
23_E 61_V 0.65 0.01
22_A 101_L 0.64 0.01
10_A 143_R 0.64 0.01
77_K 43_F 0.64 0.01
42_A 46_A 0.63 0.01
40_K 19_G 0.62 0.01
16_K 84_N 0.62 0.01
61_G 92_S 0.62 0.01
66_L 107_A 0.62 0.01
82_Q 146_E 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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