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OPENSEQ.org
L04 - S18
UniProt: Q5SHN9 - Q5SLQ0
Length: 298
Sequences: 1179
Seq/Len: 4.40
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dF 3v2eR 3v2fFContact Map
2j002j00R 2j01F 2j02R 2j03FContact Map
4juw4juwR 4juxFContact Map
4kix4kixE 4kiyR 4kizE 4kj0R 4kj1E 4kj2R 4kj3E 4kj4RContact Map
4kj54kj5E 4kj6R 4kj7E 4kj8R 4kj9E 4kjaR 4kjbE 4kjcRContact Map
3ohc3ohcR 3ohdR 3ohjF 3ohkFContact Map
3knh3knhR 3kniF 3knjR 3knkFContact Map
3uz63uz6U 3uz7U 3uz8F 3uz9FContact Map
3oge3ogeR 3ogyR 3oh5F 3oh7FContact Map
3uyd3uydU 3uyeF 3uyfU 3uygFContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
171_P 76_L 1.00 0.02
102_P 56_T 0.92 0.01
156_L 21_K 0.89 0.01
82_I 45_S 0.87 0.01
200_E 37_V 0.83 0.01
156_L 17_S 0.79 0.01
19_E 70_I 0.70 0.01
139_F 84_K 0.70 0.01
81_P 56_T 0.69 0.01
91_G 43_F 0.68 0.01
80_A 44_L 0.67 0.01
163_V 51_L 0.67 0.01
89_V 43_F 0.66 0.01
166_A 67_A 0.66 0.01
125_L 68_K 0.65 0.01
96_D 55_R 0.65 0.01
118_A 67_A 0.65 0.01
62_R 17_S 0.63 0.01
69_H 24_A 0.62 0.01
170_L 81_F 0.62 0.01
154_V 81_F 0.61 0.01
165_R 49_K 0.61 0.01
33_L 20_A 0.61 0.01
135_K 66_L 0.60 0.01
197_D 20_A 0.59 0.01
180_G 43_F 0.59 0.01
15_S 26_L 0.59 0.01
90_F 51_L 0.59 0.01
99_Y 66_L 0.58 0.01
163_V 30_D 0.58 0.01
139_F 61_K 0.57 0.01
31_H 42_R 0.57 0.01
76_G 60_A 0.57 0.01
105_V 75_I 0.57 0.01
167_A 24_A 0.57 0.01
55_G 21_K 0.56 0.01
92_P 47_T 0.56 0.01
46_R 44_L 0.56 0.01
66_P 19_K 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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