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OPENSEQ.org
L04 - L35
UniProt: Q5SHN9 - Q5SKU1
Length: 275
Sequences: 1226
Seq/Len: 4.64
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dF8 3v2fF8Contact Map
2j002j01F8 2j03F8Contact Map
4juw4juxF8Contact Map
4kix4kixE3 4kizE3 4kj1E3 4kj3E3Contact Map
4kj54kj5E3 4kj7E3 4kj9E3 4kjbE3Contact Map
2zjr2zjrC3Contact Map
4btc4btdF8Contact Map
3uyd3uyeF8 3uygF8Contact Map
4gd13r8sE3 3r8tE3Contact Map
3knh3kniF8 3knkF8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
77_D 9_G 0.97 0.01
120_E 22_V 0.90 0.01
41_L 8_K 0.88 0.01
11_V 64_Y 0.75 0.01
175_T 27_T 0.71 0.01
144_K 23_V 0.71 0.01
31_H 30_R 0.71 0.01
58_A 38_G 0.70 0.01
35_E 34_W 0.70 0.01
54_R 15_K 0.68 0.01
102_P 33_N 0.67 0.01
106_R 63_P 0.67 0.01
34_W 33_N 0.67 0.01
93_K 4_M 0.65 0.01
174_V 19_S 0.62 0.01
186_I 59_K 0.61 0.01
30_P 23_V 0.61 0.01
87_G 15_K 0.60 0.01
156_L 49_V 0.60 0.01
167_A 8_K 0.60 0.00
52_K 26_K 0.60 0.00
83_F 57_R 0.59 0.00
88_V 26_K 0.59 0.00
196_L 4_M 0.59 0.00
90_F 28_G 0.58 0.00
82_I 22_V 0.58 0.00
41_L 21_K 0.58 0.00
29_N 7_H 0.58 0.00
29_N 62_L 0.58 0.00
17_R 23_V 0.57 0.00
129_F 23_V 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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