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OPENSEQ.org
L04 - L25
UniProt: Q5SHN9 - Q5SHZ1
Length: 416
Sequences: 1220
Seq/Len: 3.18
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dFZ 3v2fFZContact Map
2j002j01FZ 2j03FZContact Map
4juw4juxFZContact Map
4kix4kixEV 4kizEV 4kj1EV 4kj3EVContact Map
4kj54kj5EV 4kj7EV 4kj9EV 4kjbEVContact Map
2zjr2zjrCSContact Map
4btc4btdFZContact Map
3uyd3uyeFV 3uygFVContact Map
4gd13r8sEV 3r8tEVContact Map
3knh3kniFZ 3knkFZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_Y 163_L 0.92 0.00
102_P 77_D 0.91 0.00
66_P 133_I 0.89 0.00
127_E 6_K 0.88 0.00
202_F 3_Y 0.83 0.00
80_A 111_V 0.81 0.00
98_S 140_D 0.81 0.00
166_A 125_L 0.79 0.00
181_L 28_M 0.78 0.00
101_L 147_G 0.77 0.00
156_L 147_G 0.76 0.00
143_A 61_L 0.76 0.00
42_A 69_T 0.75 0.00
156_L 180_V 0.75 0.00
195_D 86_V 0.72 0.00
66_P 28_M 0.71 0.00
204_N 107_T 0.70 0.00
11_V 140_D 0.69 0.00
58_A 156_K 0.69 0.00
192_L 89_F 0.69 0.00
125_L 149_S 0.69 0.00
126_V 37_V 0.69 0.00
78_I 155_L 0.68 0.00
63_K 22_G 0.67 0.00
52_K 100_V 0.67 0.00
170_L 63_D 0.67 0.00
32_L 16_S 0.66 0.00
126_V 139_V 0.66 0.00
157_V 93_D 0.65 0.00
103_K 130_P 0.65 0.00
61_G 72_R 0.65 0.00
37_V 147_G 0.65 0.00
78_I 171_I 0.65 0.00
51_T 80_R 0.64 0.00
78_I 138_E 0.64 0.00
141_A 133_I 0.64 0.00
135_K 140_D 0.64 0.00
196_L 164_A 0.64 0.00
85_G 125_L 0.64 0.00
60_S 174_V 0.63 0.00
144_K 108_P 0.63 0.00
96_D 141_V 0.63 0.00
118_A 172_A 0.63 0.00
119_R 12_G 0.63 0.00
199_W 137_I 0.62 0.00
195_D 30_N 0.62 0.00
186_I 96_V 0.62 0.00
165_R 126_V 0.62 0.00
85_G 49_R 0.61 0.00
26_A 70_L 0.61 0.00
193_V 120_I 0.61 0.00
197_D 59_L 0.61 0.00
128_A 171_I 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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