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OPENSEQ.org
L04 - L30
UniProt: Q5SHN9 - Q5SHQ6
Length: 270
Sequences: 1027
Seq/Len: 3.95
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCWContact Map
1vq81vq8CWContact Map
1vqp1vqpCWContact Map
1vqm1vqmCWContact Map
1vql1vqlCWContact Map
1vqk1vqkCWContact Map
1yhq1yhqCWContact Map
1s721s72CWContact Map
1vq91vq9CWContact Map
1vqn1vqnCWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_G 52_H 0.89 0.00
77_D 37_L 0.84 0.00
145_E 30_R 0.84 0.00
201_V 10_K 0.77 0.00
187_V 41_P 0.75 0.00
92_P 52_H 0.74 0.00
29_N 10_K 0.72 0.00
98_S 20_K 0.70 0.00
91_G 19_Q 0.68 0.00
18_R 48_E 0.67 0.00
187_V 33_Q 0.66 0.00
181_L 58_V 0.65 0.00
72_R 38_E 0.65 0.00
14_P 40_T 0.65 0.00
113_A 52_H 0.64 0.00
139_F 29_R 0.64 0.00
91_G 16_P 0.64 0.00
56_E 46_N 0.61 0.00
61_G 53_L 0.61 0.00
69_H 56_V 0.61 0.00
34_W 37_L 0.60 0.00
110_L 47_V 0.59 0.00
126_V 54_V 0.59 0.00
158_T 50_V 0.59 0.00
132_V 25_A 0.59 0.00
192_L 9_V 0.58 0.00
77_D 1_M 0.58 0.00
92_P 19_Q 0.58 0.00
184_Y 29_R 0.58 0.00
66_P 34_E 0.58 0.00
103_K 57_E 0.57 0.00
126_V 5_K 0.57 0.00
113_A 16_P 0.57 0.00
17_R 32_Q 0.57 0.00
207_G 23_L 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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