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OPENSEQ.org
L04 - L22
UniProt: Q5SHN9 - Q5SHP3
Length: 323
Sequences: 1596
Seq/Len: 5.13
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoCRContact Map
1vq81vq8CRContact Map
1vqp1vqpCRContact Map
1vqm1vqmCRContact Map
1vql1vqlCRContact Map
1vqk1vqkCRContact Map
1yhq1yhqCRContact Map
1s721s72CRContact Map
1vq91vq9CRContact Map
1vqn1vqnCRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
102_P 63_D 0.72 0.00
161_E 6_I 0.68 0.00
40_Q 88_R 0.67 0.00
165_R 72_K 0.65 0.00
126_V 20_V 0.63 0.00
130_A 29_L 0.62 0.00
170_L 2_E 0.62 0.00
185_D 24_I 0.62 0.00
32_L 88_R 0.62 0.00
31_H 97_K 0.61 0.00
74_R 84_R 0.61 0.00
100_T 60_N 0.61 0.00
198_A 34_N 0.60 0.00
137_K 83_K 0.60 0.00
19_E 47_V 0.60 0.00
197_D 37_R 0.60 0.00
200_E 64_M 0.60 0.00
33_L 63_D 0.58 0.00
139_F 89_A 0.58 0.00
59_Y 93_A 0.58 0.00
187_V 94_D 0.57 0.00
171_P 6_I 0.57 0.00
131_G 44_A 0.57 0.00
82_I 24_I 0.56 0.00
78_I 8_R 0.56 0.00
59_Y 50_V 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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