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OPENSEQ.org
L03 - S06
UniProt: Q5SHN8 - Q5SLP8
Length: 307
Sequences: 1143
Seq/Len: 3.79
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2dE 3v2eF 3v2fEContact Map
2j002j00F 2j01E 2j02F 2j03EContact Map
4juw4juwF 4juxEContact Map
4kix4kixD 4kiyF 4kizD 4kj0F 4kj1D 4kj2F 4kj3D 4kj4FContact Map
4kj54kj5D 4kj6F 4kj7D 4kj8F 4kj9D 4kjaF 4kjbD 4kjcFContact Map
3ohc3ohcF 3ohdF 3ohjE 3ohkEContact Map
3knh3knhF 3kniE 3knjF 3knkEContact Map
3uz63uz6I 3uz7I 3uz8E 3uz9EContact Map
3oge3ogeF 3ogyF 3oh5E 3oh7EContact Map
3uyd3uydI 3uyeE 3uyfI 3uygEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
37_R 19_L 0.98 0.01
197_I 46_R 0.95 0.01
33_V 85_V 0.94 0.01
202_K 30_L 0.92 0.01
101_R 94_Q 0.90 0.01
155_K 85_V 0.88 0.01
41_K 30_L 0.88 0.01
152_K 90_V 0.84 0.01
111_R 1_M 0.84 0.01
35_Q 25_I 0.83 0.01
25_V 54_K 0.82 0.01
14_I 69_E 0.81 0.01
113_F 86_R 0.80 0.01
36_R 53_A 0.78 0.01
26_I 76_A 0.77 0.01
47_V 48_L 0.77 0.01
62_P 73_N 0.77 0.01
120_W 60_F 0.75 0.01
33_V 17_S 0.74 0.01
51_F 9_V 0.73 0.01
160_Y 27_Q 0.73 0.01
172_V 40_V 0.72 0.01
166_T 31_E 0.72 0.01
3_G 26_I 0.72 0.01
3_G 8_I 0.71 0.01
26_I 80_R 0.69 0.01
93_V 91_V 0.69 0.01
172_V 66_E 0.69 0.01
33_V 70_D 0.69 0.01
3_G 85_V 0.68 0.01
62_P 39_K 0.68 0.01
9_V 17_S 0.68 0.01
95_I 28_R 0.68 0.01
90_T 24_E 0.67 0.01
125_G 88_V 0.67 0.01
24_T 46_R 0.67 0.01
150_V 83_D 0.66 0.01
195_L 43_L 0.66 0.01
201_T 90_V 0.66 0.01
31_C 6_V 0.66 0.01
138_P 12_P 0.66 0.01
167_V 46_R 0.66 0.01
144_R 41_E 0.66 0.01
152_K 1_M 0.66 0.01
146_T 89_M 0.64 0.00
46_A 68_P 0.64 0.00
156_M 11_N 0.64 0.00
152_K 27_Q 0.63 0.00
149_R 21_L 0.63 0.00
176_I 79_L 0.63 0.00
57_K 77_R 0.63 0.00
9_V 7_N 0.62 0.00
58_R 46_R 0.62 0.00
114_A 61_L 0.62 0.00
13_R 57_Q 0.62 0.00
136_R 80_R 0.61 0.00
19_R 24_E 0.61 0.00
47_V 92_K 0.61 0.00
146_T 88_V 0.61 0.00
55_N 85_V 0.61 0.00
173_V 24_E 0.61 0.00
31_C 30_L 0.60 0.00
78_L 66_E 0.60 0.00
172_V 85_V 0.60 0.00
185_K 90_V 0.60 0.00
13_R 45_L 0.60 0.00
193_G 46_R 0.60 0.00
75_V 89_M 0.60 0.00
24_T 76_A 0.60 0.00
163_E 37_V 0.60 0.00
114_A 91_V 0.60 0.00
67_F 44_G 0.59 0.00
29_G 10_L 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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