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OPENSEQ.org

L03 - L25
UniProt: Q5SHN8 - Q5SHZ1
Length: 412
Sequences: 1187
Seq/Len: 3.08
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dEZ 3v2fEZContact Map
2j002j01EZ 2j03EZContact Map
4juw4juxEZContact Map
4kix4kixDV 4kizDV 4kj1DV 4kj3DVContact Map
4kj54kj5DV 4kj7DV 4kj9DV 4kjbDVContact Map
2zjr2zjrBSContact Map
4btc4btdEZContact Map
3uyd3uyeEV 3uygEVContact Map
4gd13r8sDV 3r8tDVContact Map
3ohc3ohjEZ 3ohkEZContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_V 91_L 0.94 0.00
184_V 105_V 0.88 0.00
41_K 101_P 0.87 0.00
192_N 24_L 0.84 0.00
4_I 71_V 0.84 0.00
196_V 59_L 0.83 0.00
196_V 24_L 0.82 0.00
76_R 86_V 0.81 0.00
143_N 138_E 0.81 0.00
149_R 48_F 0.79 0.00
4_I 91_L 0.78 0.00
184_V 54_H 0.78 0.00
57_K 174_V 0.77 0.00
54_Q 139_V 0.77 0.00
40_E 148_D 0.76 0.00
163_E 127_K 0.76 0.00
69_K 96_V 0.74 0.00
199_R 78_K 0.74 0.00
132_H 128_V 0.73 0.00
93_V 5_L 0.73 0.00
20_A 71_V 0.73 0.00
67_F 72_R 0.72 0.00
114_A 92_S 0.72 0.00
152_K 72_R 0.72 0.00
108_S 102_L 0.71 0.00
148_G 77_D 0.71 0.00
14_I 66_S 0.71 0.00
45_T 126_V 0.70 0.00
105_T 43_E 0.69 0.00
121_N 101_P 0.69 0.00
51_F 150_L 0.69 0.00
181_L 38_Y 0.69 0.00
140_S 174_V 0.68 0.00
106_G 25_P 0.68 0.00
182_L 54_H 0.68 0.00
52_L 161_V 0.67 0.00
29_G 172_A 0.67 0.00
177_P 105_V 0.66 0.00
184_V 49_R 0.66 0.00
173_V 77_D 0.66 0.00
85_N 174_V 0.66 0.00
188_V 46_K 0.66 0.00
62_P 50_Q 0.66 0.00
67_F 113_A 0.65 0.00
12_T 66_S 0.65 0.00
42_D 77_D 0.65 0.00
5_L 86_V 0.65 0.00
37_R 46_K 0.65 0.00
181_L 51_A 0.65 0.00
108_S 165_V 0.65 0.00
106_G 101_P 0.64 0.00
142_G 114_G 0.64 0.00
45_T 178_E 0.64 0.00
82_R 171_I 0.63 0.00
53_P 88_F 0.63 0.00
63_L 46_K 0.63 0.00
73_E 141_V 0.63 0.00
92_T 35_R 0.63 0.00
179_E 75_N 0.62 0.00
69_K 74_V 0.62 0.00
94_E 173_A 0.62 0.00
102_V 145_E 0.62 0.00
150_V 91_L 0.62 0.00
57_K 43_E 0.62 0.00
128_S 179_D 0.62 0.00
179_E 37_V 0.62 0.00
202_K 143_G 0.62 0.00
40_E 124_I 0.62 0.00
160_Y 105_V 0.62 0.00
143_N 32_H 0.61 0.00
191_P 154_D 0.61 0.00
89_D 111_V 0.61 0.00
84_F 27_V 0.61 0.00
108_S 150_L 0.61 0.00
168_M 130_P 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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