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OPENSEQ.org
L03 - L24
UniProt: Q5SHN8 - Q5SHP9
Length: 316
Sequences: 1372
Seq/Len: 4.50
I_Prob: 0.17
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoBTContact Map
1vq81vq8BTContact Map
1vqp1vqpBTContact Map
1vqm1vqmBTContact Map
1vql1vqlBTContact Map
1vqk1vqkBTContact Map
1yhq1yhqBTContact Map
1s721s72BTContact Map
1vq91vq9BTContact Map
1vqn1vqnBTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
120_W 10_G 1.17 0.17
37_R 88_K 0.93 0.08
74_P 50_R 0.84 0.06
194_G 84_R 0.82 0.05
99_G 48_A 0.75 0.04
193_G 47_K 0.75 0.04
91_V 64_E 0.73 0.04
14_I 63_K 0.72 0.04
184_V 14_L 0.70 0.03
142_G 58_G 0.67 0.03
181_L 63_K 0.67 0.03
182_L 66_P 0.64 0.03
46_A 15_V 0.64 0.03
150_V 85_V 0.64 0.03
121_N 98_V 0.64 0.03
118_K 41_G 0.64 0.03
149_R 106_L 0.63 0.02
47_V 103_G 0.63 0.02
159_H 30_V 0.62 0.02
172_V 42_V 0.61 0.02
67_F 102_C 0.61 0.02
50_G 8_K 0.61 0.02
21_V 17_S 0.61 0.02
60_N 84_R 0.59 0.02
171_E 44_I 0.58 0.02
123_A 29_E 0.58 0.02
18_D 51_V 0.57 0.02
153_G 86_R 0.57 0.02
182_L 73_R 0.56 0.02
21_V 38_I 0.55 0.02
60_N 35_Y 0.55 0.02
4_I 94_K 0.55 0.02
106_G 7_V 0.55 0.02
113_F 60_F 0.55 0.02
198_V 103_G 0.55 0.02
150_V 94_K 0.55 0.02
195_L 51_V 0.55 0.02
28_A 26_K 0.54 0.02
178_E 98_V 0.54 0.02
79_R 9_K 0.54 0.02
40_E 61_I 0.54 0.02
174_D 44_I 0.53 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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