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OPENSEQ.org
L03 - L34
UniProt: Q5SHN8 - P80340
Length: 255
Sequences: 937
Seq/Len: 3.79
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dE7 3v2fE7Contact Map
2j002j01E7 2j03E7Contact Map
4juw4juxE7Contact Map
4kix4kixD2 4kizD2 4kj1D2 4kj3D2Contact Map
4kj54kj5D2 4kj7D2 4kj9D2 4kjbD2Contact Map
2zjr2zjrB2Contact Map
4btc4btdE7Contact Map
3uyd3uyeE7 3uygE7Contact Map
4gd13r8sD2 3r8tD2Contact Map
3ohc3ohjE7 3ohkE7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
152_K 43_T 0.87 0.00
3_G 8_N 0.86 0.00
91_V 44_P 0.85 0.00
135_H 14_K 0.84 0.00
155_K 33_R 0.84 0.00
2_K 16_H 0.82 0.00
26_I 26_G 0.81 0.00
105_T 32_K 0.80 0.00
46_A 24_T 0.80 0.00
191_P 31_L 0.80 0.00
196_V 12_R 0.80 0.00
144_R 29_K 0.79 0.00
23_V 14_K 0.73 0.00
3_G 3_R 0.72 0.00
76_R 23_R 0.72 0.00
36_R 15_T 0.69 0.00
13_R 8_N 0.69 0.00
67_F 43_T 0.68 0.00
9_V 41_R 0.68 0.00
30_P 37_K 0.68 0.00
185_K 5_W 0.67 0.00
151_Y 8_N 0.67 0.00
87_E 43_T 0.67 0.00
151_Y 6_Q 0.66 0.00
4_I 33_R 0.66 0.00
184_V 31_L 0.65 0.00
134_I 14_K 0.65 0.00
141_I 15_T 0.64 0.00
162_A 14_K 0.64 0.00
177_P 26_G 0.62 0.00
159_H 26_G 0.62 0.00
159_H 9_R 0.61 0.00
133_K 8_N 0.61 0.00
82_R 42_L 0.60 0.00
121_N 13_A 0.60 0.00
108_S 14_K 0.60 0.00
175_V 40_W 0.59 0.00
43_G 22_M 0.59 0.00
187_A 33_R 0.59 0.00
90_T 24_T 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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