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OPENSEQ.org
S10 - S11
UniProt: Q5SHN7 - P80376
Length: 234
Sequences: 802
Seq/Len: 3.53
I_Prob: 0.25
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeJKContact Map
3v2c3v2cJK 3v2eJKContact Map
2uub2uubJKContact Map
2j002j00JK 2j02JKContact Map
3t1y3t1yJKContact Map
4juw4juwJKContact Map
2uua2uuaJKContact Map
4b3m4b3mJKContact Map
2uxc2uxcJKContact Map
4kix4kiyJK 4kj0JK 4kj2JK 4kj4JKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
80_K 95_I 1.25 0.25
91_P 103_L 1.12 0.18
92_T 65_A 1.10 0.17
63_F 30_V 1.08 0.16
63_F 70_K 1.06 0.15
79_R 22_H 1.05 0.14
91_P 67_D 1.04 0.14
10_G 10_V 1.03 0.13
97_E 74_A 1.00 0.12
48_T 84_V 1.00 0.12
12_D 31_T 0.99 0.12
21_Q 122_K 0.99 0.12
71_L 17_G 0.99 0.12
14_K 18_R 0.97 0.11
14_K 83_I 0.96 0.10
8_L 96_R 0.94 0.10
76_N 33_T 0.91 0.09
72_V 100_A 0.90 0.09
76_N 21_I 0.89 0.08
38_I 114_V 0.88 0.08
44_V 51_K 0.87 0.08
68_H 69_A 0.87 0.07
62_H 93_Q 0.86 0.07
91_P 95_I 0.86 0.07
3_K 80_V 0.86 0.07
26_A 101_S 0.85 0.07
40_L 101_S 0.85 0.07
72_V 95_I 0.85 0.07
59_S 44_S 0.84 0.07
96_I 99_Q 0.82 0.06
58_D 67_D 0.82 0.06
19_S 42_W 0.82 0.06
27_A 5_P 0.81 0.06
69_N 84_V 0.81 0.06
86_M 58_P 0.81 0.06
65_L 40_I 0.81 0.06
73_D 125_F 0.80 0.06
16_L 47_V 0.80 0.06
3_K 21_I 0.80 0.06
35_S 80_V 0.79 0.06
43_R 2_A 0.78 0.05
33_Q 4_K 0.78 0.05
7_K 66_L 0.78 0.05
11_F 53_S 0.78 0.05
25_E 14_V 0.78 0.05
69_N 9_K 0.78 0.05
76_N 36_D 0.77 0.05
100_T 106_K 0.77 0.05
55_K 15_A 0.77 0.05
15_T 63_L 0.77 0.05
44_V 104_Q 0.76 0.05
10_G 115_P 0.75 0.05
42_T 115_P 0.74 0.05
101_V 116_H 0.74 0.05
16_L 99_Q 0.74 0.04
43_R 8_K 0.74 0.04
45_R 36_D 0.73 0.04
31_G 116_H 0.73 0.04
43_R 12_R 0.73 0.04
20_A 109_V 0.73 0.04
3_K 5_P 0.72 0.04
54_F 55_K 0.72 0.04
96_I 73_M 0.71 0.04
2_P 127_K 0.71 0.04
97_E 58_P 0.70 0.04
15_T 24_S 0.70 0.04
45_R 105_V 0.70 0.04
47_F 3_K 0.70 0.04
7_K 92_E 0.69 0.04
21_Q 7_K 0.69 0.04
21_Q 28_T 0.69 0.04
91_P 15_A 0.69 0.04
58_D 48_I 0.69 0.04
32_A 39_P 0.69 0.04
12_D 32_I 0.69 0.04
87_T 40_I 0.69 0.04
66_R 56_G 0.69 0.04
8_L 29_I 0.68 0.04
72_V 73_M 0.68 0.04
42_T 65_A 0.68 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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