| UniProt: | Q56222 - Q56219 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 645 | ||
| Sequences: | 1104 | ||
| Seq/Len: | 1.98 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 3ias | 1SJA:5NEW:4DVM | Contact Map |
| 3i9v | 1A:5E:4D | Contact Map |
| 3m9s | 1A:5E:4D | Contact Map |
| 2fug | 1SAJ:5NEW:4VMD | Contact Map |
| 3iam | 1A:5E:4D | Contact Map |
| 4hea | 1B:5F:4E | Contact Map |
| 2ybb | 1:5:4 | Contact Map |
| i | j | Scaled Score | I_Prob |
| 122_G | 104_V | 0.99 | 0.00 |
| 115_I | 86_S | 0.85 | 0.00 |
| 89_L | 40_H | 0.82 | 0.00 |
| 57_V | 108_W | 0.80 | 0.00 |
| 54_I | 54_G | 0.78 | 0.00 |
| 195_L | 104_V | 0.78 | 0.00 |
| 145_L | 107_L | 0.77 | 0.00 |
| 236_D | 46_F | 0.77 | 0.00 |
| 339_D | 84_D | 0.77 | 0.00 |
| 119_I | 39_A | 0.75 | 0.00 |
| 318_A | 122_F | 0.73 | 0.00 |
| 174_H | 104_V | 0.73 | 0.00 |
| 34_R | 32_E | 0.72 | 0.00 |
| 284_L | 90_V | 0.70 | 0.00 |
| 273_R | 46_F | 0.69 | 0.00 |
| 93_A | 119_Y | 0.68 | 0.00 |
| 118_M | 88_F | 0.67 | 0.00 |
| 149_I | 109_G | 0.67 | 0.00 |
| 235_A | 106_D | 0.66 | 0.00 |
| 236_D | 107_L | 0.66 | 0.00 |
| 270_T | 56_D | 0.66 | 0.00 |
| 59_R | 104_V | 0.65 | 0.00 |
| 260_R | 37_E | 0.65 | 0.00 |
| 330_L | 94_V | 0.65 | 0.00 |
| 74_L | 135_I | 0.65 | 0.00 |
| 251_L | 104_V | 0.64 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)