| UniProt: | Q56221 - Q56226 |
Query Sequences: |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 276 | ||
| Sequences: | 1208 | ||
| Seq/Len: | 4.65 | ||
| I_Prob: | 0.00 |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hea | 2C:KS | Contact Map |
| i | j | Scaled Score | I_Prob |
| 100_L | 8_A | 0.85 | 0.00 |
| 145_V | 43_V | 0.82 | 0.00 |
| 98_D | 55_V | 0.80 | 0.00 |
| 129_H | 46_A | 0.76 | 0.00 |
| 99_Y | 58_L | 0.75 | 0.00 |
| 153_L | 87_V | 0.74 | 0.00 |
| 136_V | 40_L | 0.73 | 0.00 |
| 80_L | 81_H | 0.72 | 0.00 |
| 131_A | 63_V | 0.72 | 0.00 |
| 119_V | 78_I | 0.71 | 0.00 |
| 140_P | 27_V | 0.71 | 0.00 |
| 119_V | 43_V | 0.71 | 0.00 |
| 145_V | 12_A | 0.71 | 0.00 |
| 102_E | 6_T | 0.70 | 0.00 |
| 126_G | 47_R | 0.69 | 0.00 |
| 82_V | 24_A | 0.68 | 0.00 |
| 131_A | 55_V | 0.68 | 0.00 |
| 149_R | 82_R | 0.68 | 0.00 |
| 153_L | 39_N | 0.68 | 0.00 |
| 120_Q | 10_L | 0.68 | 0.00 |
| 82_V | 75_I | 0.67 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)