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OPENSEQ.org

S13 - S20
UniProt: P80377 - P80380
Length: 232
Sequences: 1159
Seq/Len: 5.54
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeMTContact Map
3v2c3v2cMT 3v2eMTContact Map
2uub2uubMTContact Map
2j002j00MT 2j02MTContact Map
3t1y3t1yMTContact Map
4juw4juwMTContact Map
2uua2uuaMTContact Map
4b3m4b3mMTContact Map
2uxc2uxcMTContact Map
4kix4kiyMT 4kj0MT 4kj2MT 4kj4MTContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
50_E 49_A 0.79 0.00
94_R 33_I 0.77 0.00
94_R 87_K 0.76 0.00
83_D 9_N 0.73 0.00
123_A 83_R 0.73 0.00
90_L 32_A 0.71 0.00
98_V 45_Q 0.71 0.00
80_R 64_D 0.70 0.00
88_R 12_A 0.70 0.00
9_I 87_K 0.69 0.00
21_Y 49_A 0.68 0.00
40_N 37_S 0.68 0.00
50_E 8_R 0.67 0.00
111_K 29_K 0.67 0.00
113_P 73_H 0.67 0.00
84_I 81_K 0.66 0.00
94_R 22_R 0.65 0.00
20_T 15_R 0.65 0.00
77_N 60_E 0.65 0.00
69_E 8_R 0.65 0.00
93_R 34_K 0.64 0.00
81_L 12_A 0.63 0.00
48_L 79_R 0.63 0.00
56_L 35_T 0.63 0.00
114_R 13_L 0.62 0.00
55_R 36_L 0.60 0.00
42_A 11_S 0.60 0.00
72_A 9_N 0.60 0.00
81_L 19_S 0.60 0.00
66_L 56_M 0.59 0.00
75_A 51_E 0.59 0.00
18_A 23_R 0.59 0.00
47_D 18_Q 0.58 0.00
22_I 44_A 0.58 0.00
43_T 39_K 0.58 0.00
8_E 89_R 0.58 0.00
20_T 67_A 0.57 0.00
37_T 10_L 0.56 0.00
12_N 62_L 0.56 0.00
86_C 44_A 0.56 0.00
15_V 31_S 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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