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OPENSEQ.org
S09 - S14
UniProt: P80374 - Q5SHQ1
Length: 189
Sequences: 1089
Seq/Len: 5.86
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeINContact Map
3v2c3v2cIN 3v2eINContact Map
2uub2uubINContact Map
2j002j00IN 2j02INContact Map
3t1y3t1yINContact Map
4juw4juwINContact Map
2uua2uuaINContact Map
4b3m4b3mINContact Map
2uxc2uxcINContact Map
2vqf2vqfINContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_R 48_A 0.79 0.00
116_K 49_H 0.78 0.00
4_Y 59_A 0.77 0.00
42_R 59_A 0.76 0.00
123_P 49_H 0.76 0.00
75_D 36_F 0.75 0.00
122_A 49_H 0.73 0.00
21_P 26_R 0.70 0.00
9_R 48_A 0.68 0.00
121_R 25_V 0.67 0.00
37_F 51_G 0.65 0.00
71_S 31_R 0.65 0.00
109_V 35_R 0.65 0.00
48_E 37_F 0.64 0.00
83_R 39_L 0.64 0.00
36_Y 33_V 0.63 0.00
40_L 36_F 0.63 0.00
14_V 26_R 0.63 0.00
123_P 31_R 0.62 0.00
89_N 7_I 0.62 0.00
57_G 12_R 0.62 0.00
58_H 33_V 0.61 0.00
78_K 44_L 0.60 0.00
125_Y 2_A 0.60 0.00
77_I 49_H 0.60 0.00
62_Y 39_L 0.60 0.00
5_Y 16_F 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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