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OPENSEQ.org

S04 - S15
UniProt: P80373 - Q5SJ76
Length: 298
Sequences: 1248
Seq/Len: 4.20
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDOContact Map
3v2c3v2cDO 3v2eDOContact Map
2uub2uubDOContact Map
2j002j00DO 2j02DOContact Map
3t1y3t1yDOContact Map
4juw4juwDOContact Map
2uua2uuaDOContact Map
4b3m4b3mDOContact Map
2uxc2uxcDOContact Map
4kix4kiyDO 4kj0DO 4kj2DO 4kj4DOContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_K 32_L 0.84 0.00
65_R 89_G 0.82 0.00
2_G 53_H 0.81 0.00
141_R 29_V 0.79 0.00
99_S 12_I 0.78 0.00
64_L 43_L 0.72 0.00
133_V 72_R 0.71 0.00
39_P 9_Q 0.70 0.00
12_C 8_K 0.70 0.00
167_G 89_G 0.69 0.00
113_S 87_I 0.69 0.00
54_Y 52_S 0.69 0.00
49_R 43_L 0.69 0.00
185_F 18_F 0.68 0.00
136_P 79_R 0.67 0.00
201_Q 79_R 0.67 0.00
174_L 16_A 0.66 0.00
136_P 25_T 0.65 0.00
120_L 13_Q 0.65 0.00
132_R 82_I 0.65 0.00
161_N 59_M 0.65 0.00
50_R 48_K 0.65 0.00
150_E 22_T 0.64 0.00
89_T 65_R 0.63 0.00
88_V 61_G 0.63 0.00
65_R 84_K 0.63 0.00
89_T 35_R 0.62 0.00
7_P 33_T 0.62 0.00
173_W 31_L 0.62 0.00
78_L 53_H 0.62 0.00
8_V 17_R 0.61 0.00
184_K 45_V 0.61 0.00
46_K 37_N 0.60 0.00
65_R 35_R 0.60 0.00
13_R 39_L 0.60 0.00
208_S 59_M 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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