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OPENSEQ.org
S04 - S17
UniProt: P80373 - Q5SHP7
Length: 314
Sequences: 1148
Seq/Len: 3.96
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDQContact Map
3v2c3v2cDQ 3v2eDQContact Map
2uub2uubDQContact Map
2j002j00DQ 2j02DQContact Map
3t1y3t1yDQContact Map
4juw4juwDQContact Map
2uua2uuaDQContact Map
4b3m4b3mDQContact Map
2uxc2uxcDQContact Map
4kix4kiyDQ 4kj0DQ 4kj2DQ 4kj4DQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
3_R 33_G 0.89 0.00
76_R 30_P 0.83 0.00
146_I 21_V 0.79 0.00
209_R 73_V 0.77 0.00
96_L 52_K 0.74 0.00
65_R 67_K 0.72 0.00
134_D 67_K 0.72 0.00
198_V 18_T 0.71 0.00
132_R 7_T 0.69 0.00
52_S 42_Y 0.69 0.00
79_F 7_T 0.68 0.00
10_R 39_S 0.68 0.00
145_E 74_L 0.68 0.00
78_L 72_R 0.68 0.00
119_Q 71_F 0.67 0.00
141_R 76_L 0.67 0.00
183_G 41_K 0.67 0.00
17_V 71_F 0.65 0.00
73_R 59_I 0.65 0.00
54_Y 72_R 0.64 0.00
103_N 46_D 0.63 0.00
161_N 18_T 0.63 0.00
35_R 76_L 0.63 0.00
88_V 67_K 0.62 0.00
115_R 67_K 0.62 0.00
126_I 36_I 0.61 0.00
169_K 36_I 0.61 0.00
53_D 34_K 0.61 0.00
117_A 66_S 0.60 0.00
88_V 19_V 0.60 0.00
138_Y 79_S 0.60 0.00
85_K 52_K 0.60 0.00
45_Q 19_V 0.59 0.00
65_R 34_K 0.59 0.00
58_L 12_S 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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