OPENSEQ.org
S02 - S12
UniProt: P80371 - Q5SHN3
Length: 388
Sequences: 1140
Seq/Len: 3.23
I_Prob: 0.38
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeBLContact Map
3v2c3v2cBL 3v2eBLContact Map
2uub2uubBLContact Map
2j002j00BL 2j02BLContact Map
3t1y3t1yBLContact Map
4juw4juwBLContact Map
2uua2uuaBLContact Map
4b3m4b3mBLContact Map
2uxc2uxcBLContact Map
4kix4kiyBL 4kj0BL 4kj2BL 4kj4BLContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
101_M 40_V 1.32 0.38
31_Y 122_P 1.19 0.27
140_H 25_K 1.12 0.22
225_A 82_I 1.10 0.21
200_I 97_I 1.10 0.21
148_Y 70_E 1.08 0.20
101_M 52_V 1.04 0.18
76_Q 2_P 1.04 0.18
218_A 26_G 1.04 0.18
167_P 79_V 0.98 0.15
93_V 21_V 0.96 0.14
177_A 11_G 0.95 0.13
140_H 58_T 0.94 0.13
150_S 104_A 0.94 0.12
62_A 105_A 0.94 0.12
122_F 82_I 0.94 0.12
169_K 104_A 0.91 0.11
45_Q 5_N 0.89 0.10
29_A 121_K 0.89 0.10
153_R 82_I 0.87 0.10
140_H 52_V 0.87 0.10
118_L 64_T 0.86 0.09
86_E 82_I 0.83 0.08
88_A 122_P 0.83 0.08
30_R 122_P 0.82 0.08
197_V 112_K 0.81 0.07
13_A 112_K 0.80 0.07
66_G 27_A 0.80 0.07
118_L 65_A 0.79 0.07
208_I 64_T 0.79 0.07
118_L 26_G 0.79 0.07
101_M 38_R 0.78 0.07
88_A 109_D 0.78 0.07
143_E 113_S 0.77 0.06
124_S 101_V 0.77 0.06
137_R 104_A 0.77 0.06
130_R 30_R 0.76 0.06
128_E 109_D 0.76 0.06
134_E 33_V 0.75 0.06
23_R 2_P 0.75 0.06
169_K 68_P 0.75 0.06
40_H 21_V 0.75 0.06
135_Q 68_P 0.75 0.06
161_A 8_V 0.74 0.06
195_D 112_K 0.74 0.06
68_I 104_A 0.74 0.06
113_H 58_T 0.74 0.06
211_I 113_S 0.73 0.06
140_H 38_R 0.73 0.05
210_S 79_V 0.73 0.05
15_V 56_R 0.73 0.05
23_R 68_P 0.72 0.05
147_K 104_A 0.72 0.05
230_V 27_A 0.72 0.05
186_A 106_G 0.71 0.05
185_I 109_D 0.71 0.05
95_Q 98_V 0.71 0.05
80_I 124_E 0.71 0.05
81_V 82_I 0.71 0.05
47_T 56_R 0.70 0.05
220_D 80_V 0.70 0.05
222_I 49_L 0.70 0.05
161_A 10_K 0.70 0.05
8_K 5_N 0.69 0.04
46_K 96_H 0.69 0.04
162_I 70_E 0.69 0.04
83_M 17_K 0.69 0.04
123_A 8_V 0.69 0.04
93_V 22_P 0.69 0.04
67_T 18_K 0.68 0.04
31_Y 108_K 0.68 0.04
80_I 119_T 0.68 0.04
138_L 109_D 0.68 0.04
52_E 15_V 0.68 0.04
36_R 33_V 0.68 0.04
96_R 66_Y 0.68 0.04
136_V 70_E 0.68 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0177 seconds.