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OPENSEQ.org
L34 - S07
UniProt: P80340 - P17291
Length: 205
Sequences: 757
Seq/Len: 3.77
I_Prob: 0.29
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
4kix4kix2 4kiyG 4kiz2 4kj0G 4kj12 4kj2G 4kj32 4kj4GContact Map
4kj54kj52 4kj6G 4kj72 4kj8G 4kj92 4kjaG 4kjb2 4kjcGContact Map
4gd13r8s2 3r8t2 4gd1G 4gd2GContact Map
3ofo3ofoG 3ofpG 3ofq2 3ofr2Contact Map
3i1m3i1mG 3i1n2 3i1oG 3i1p2Contact Map
3ofa3ofaG 3ofbG 3ofc2 3ofd2Contact Map
3sfs3sfsG 3sgf6Contact Map
2qal2qalG 2qam2 2qanG 2qao2Contact Map
2i2p2i2pG 2i2t2 2i2uG 2i2v2Contact Map
3oaq3oaqG 3oarG 3oas2 3oat2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
16_H 113_E 1.25 0.29
30_V 4_R 1.18 0.24
32_K 33_D 1.15 0.22
41_R 100_A 0.98 0.13
29_K 76_R 0.96 0.12
19_R 92_S 0.92 0.11
8_N 17_V 0.88 0.09
13_A 108_A 0.86 0.09
42_L 46_A 0.86 0.09
10_R 107_A 0.86 0.09
41_R 138_K 0.86 0.08
25_P 41_R 0.84 0.08
41_R 106_Q 0.81 0.07
11_K 22_L 0.81 0.07
9_R 20_D 0.79 0.06
20_A 107_A 0.77 0.06
10_R 17_V 0.77 0.06
41_R 137_K 0.76 0.06
38_G 83_A 0.76 0.06
13_A 25_A 0.76 0.06
23_R 138_K 0.76 0.06
16_H 28_N 0.76 0.06
13_A 37_N 0.75 0.06
9_R 73_M 0.75 0.06
19_R 77_S 0.75 0.05
36_Q 13_Q 0.74 0.05
3_R 23_V 0.73 0.05
40_W 143_R 0.72 0.05
37_K 93_P 0.72 0.05
12_R 143_R 0.71 0.05
24_T 107_A 0.69 0.04
43_T 119_R 0.68 0.04
33_R 125_M 0.68 0.04
3_R 59_L 0.68 0.04
8_N 143_R 0.68 0.04
8_N 101_L 0.66 0.04
33_R 51_Q 0.66 0.04
14_K 154_Y 0.65 0.04
33_R 18_Y 0.65 0.03
19_R 84_N 0.64 0.03
10_R 63_K 0.64 0.03
24_T 129_E 0.63 0.03
24_T 32_R 0.63 0.03
37_K 111_R 0.63 0.03
11_K 97_Q 0.62 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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