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OPENSEQ.org
L32 - S18
UniProt: P80339 - Q5SLQ0
Length: 148
Sequences: 742
Seq/Len: 5.94
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2d5 3v2eR 3v2f5Contact Map
2j002j00R 2j015 2j02R 2j035Contact Map
3uyd3uydU 3uye5 3uyfU 3uyg5Contact Map
3ohc3ohcR 3ohdR 3ohj5 3ohk5Contact Map
3knh3knhR 3kni5 3knjR 3knk5Contact Map
3ohy3ohyR 3ohz5 3oi0R 3oi15Contact Map
3f1e3f1eR 3f1f5 3f1gR 3f1h5Contact Map
3v223v22R 3v235 3v24R 3v255Contact Map
3uz63uz6U 3uz7U 3uz85 3uz95Contact Map
3oge3ogeR 3ogyR 3oh55 3oh75Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_R 71_K 1.02 0.04
53_A 59_S 1.01 0.04
8_K 81_F 0.92 0.03
13_K 72_R 0.88 0.03
45_V 72_R 0.85 0.02
54_G 37_V 0.83 0.02
38_A 66_L 0.80 0.02
9_K 55_R 0.79 0.02
8_K 25_T 0.78 0.02
38_A 46_E 0.78 0.02
57_V 60_A 0.77 0.02
10_K 33_D 0.76 0.02
40_K 83_E 0.73 0.01
20_R 53_R 0.71 0.01
51_Y 76_L 0.71 0.01
49_C 62_E 0.70 0.01
15_R 72_R 0.69 0.01
53_A 27_G 0.69 0.01
36_C 38_E 0.69 0.01
4_H 55_R 0.68 0.01
12_S 77_G 0.67 0.01
58_L 83_E 0.67 0.01
59_E 68_K 0.66 0.01
7_P 47_T 0.66 0.01
40_K 20_A 0.66 0.01
8_K 77_G 0.66 0.01
5_P 21_K 0.65 0.01
5_P 56_T 0.65 0.01
9_K 31_L 0.65 0.01
18_A 56_T 0.65 0.01
13_K 27_G 0.65 0.01
30_L 38_E 0.65 0.01
23_H 81_F 0.64 0.01
53_A 75_I 0.64 0.01
20_R 54_R 0.64 0.01
54_G 57_G 0.63 0.01
45_V 42_R 0.63 0.01
37_K 82_T 0.63 0.01
31_V 23_K 0.62 0.01
46_C 59_S 0.62 0.01
55_R 17_S 0.61 0.01
55_R 72_R 0.61 0.01
41_P 65_I 0.61 0.01
12_S 83_E 0.61 0.01
43_H 20_A 0.60 0.01
25_L 73_A 0.60 0.01
7_P 48_G 0.60 0.01
55_R 79_L 0.60 0.01
6_V 55_R 0.59 0.01
24_A 44_L 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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