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OPENSEQ.org
L32 - S05
UniProt: P80339 - Q5SHQ5
Length: 222
Sequences: 770
Seq/Len: 3.60
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2d5 3v2eE 3v2f5Contact Map
2j002j00E 2j015 2j02E 2j035Contact Map
4juw4juwE 4jux5Contact Map
4kix4kix0 4kiyE 4kiz0 4kj0E 4kj10 4kj2E 4kj30 4kj4EContact Map
4kj54kj50 4kj6E 4kj70 4kj8E 4kj90 4kjaE 4kjb0 4kjcEContact Map
3uyd3uydH 3uye5 3uyfH 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1E 4gd2EContact Map
3knh3knhE 3kni5 3knjE 3knk5Contact Map
3ohc3ohcE 3ohdE 3ohj5 3ohk5Contact Map
3ohy3ohyE 3ohz5 3oi0E 3oi15Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_P 36_D 0.99 0.01
12_S 136_M 0.91 0.01
15_R 108_A 0.88 0.01
23_H 105_V 0.85 0.01
22_H 58_A 0.85 0.01
12_S 125_S 0.84 0.01
19_R 26_F 0.83 0.01
10_K 83_E 0.83 0.01
19_R 48_A 0.81 0.01
34_P 146_A 0.81 0.01
55_R 143_R 0.77 0.01
5_P 126_R 0.77 0.01
10_K 82_V 0.76 0.01
31_V 132_A 0.75 0.01
20_R 52_P 0.75 0.01
10_K 119_L 0.75 0.01
15_R 120_T 0.75 0.01
59_E 149_E 0.74 0.01
41_P 13_I 0.74 0.01
21_S 127_N 0.74 0.01
57_V 156_A 0.73 0.01
10_K 74_G 0.72 0.01
6_V 7_E 0.71 0.01
37_K 66_M 0.71 0.01
59_E 90_V 0.71 0.01
18_A 122_E 0.70 0.01
53_A 84_F 0.70 0.01
27_P 90_V 0.69 0.01
28_P 46_G 0.68 0.00
4_H 93_P 0.67 0.00
20_R 11_I 0.67 0.00
14_A 10_M 0.67 0.00
9_K 78_H 0.67 0.00
29_T 117_D 0.67 0.00
29_T 26_F 0.67 0.00
4_H 63_R 0.66 0.00
20_R 30_A 0.66 0.00
36_C 19_M 0.66 0.00
48_E 126_R 0.66 0.00
25_L 64_R 0.65 0.00
51_Y 71_L 0.65 0.00
58_L 136_M 0.65 0.00
10_K 150_R 0.65 0.00
6_V 24_R 0.65 0.00
5_P 10_M 0.65 0.00
58_L 61_Y 0.64 0.00
38_A 16_T 0.63 0.00
53_A 49_P 0.63 0.00
53_A 93_P 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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