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OPENSEQ.org
L32 - S03
UniProt: P80339 - P80372
Length: 299
Sequences: 741
Seq/Len: 2.77
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2d5 3v2eC 3v2f5Contact Map
2j002j00C 2j015 2j02C 2j035Contact Map
4juw4juwC 4jux5Contact Map
4kix4kix0 4kiyC 4kiz0 4kj0C 4kj10 4kj2C 4kj30 4kj4CContact Map
4kj54kj50 4kj6C 4kj70 4kj8C 4kj90 4kjaC 4kjb0 4kjcCContact Map
3uyd3uydF 3uye5 3uyfF 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1C 4gd2CContact Map
3ohc3ohcC 3ohdC 3ohj5 3ohk5Contact Map
3knh3knhC 3kni5 3knjC 3knk5Contact Map
3f1e3f1eC 3f1f5 3f1gC 3f1h5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_K 158_G 1.00 0.01
12_S 161_E 0.97 0.01
25_L 124_I 0.96 0.01
10_K 204_L 0.92 0.01
9_K 149_A 0.89 0.00
19_R 13_G 0.87 0.00
54_G 143_E 0.86 0.00
22_H 79_R 0.86 0.00
59_E 120_V 0.86 0.00
6_V 173_V 0.85 0.00
10_K 45_K 0.83 0.00
58_L 181_N 0.82 0.00
10_K 165_T 0.82 0.00
26_T 149_A 0.81 0.00
48_E 143_E 0.81 0.00
12_S 35_E 0.81 0.00
31_V 158_G 0.81 0.00
19_R 126_R 0.79 0.00
6_V 176_H 0.79 0.00
16_R 103_V 0.78 0.00
45_V 120_V 0.78 0.00
54_G 99_V 0.78 0.00
34_P 101_L 0.77 0.00
5_P 152_I 0.77 0.00
15_R 141_V 0.76 0.00
29_T 23_Y 0.76 0.00
45_V 87_L 0.74 0.00
40_K 79_R 0.74 0.00
10_K 8_I 0.74 0.00
11_T 173_V 0.73 0.00
42_P 39_I 0.72 0.00
29_T 66_V 0.72 0.00
28_P 35_E 0.72 0.00
13_K 193_Y 0.71 0.00
19_R 202_I 0.71 0.00
5_P 158_G 0.71 0.00
32_P 12_L 0.71 0.00
26_T 55_V 0.69 0.00
57_V 192_T 0.69 0.00
36_C 99_V 0.68 0.00
28_P 147_K 0.68 0.00
17_D 14_I 0.68 0.00
40_K 129_A 0.67 0.00
37_K 140_R 0.67 0.00
53_A 151_V 0.67 0.00
10_K 56_D 0.67 0.00
51_Y 18_W 0.67 0.00
14_A 6_H 0.67 0.00
34_P 112_S 0.67 0.00
59_E 71_A 0.67 0.00
4_H 72_K 0.67 0.00
12_S 193_Y 0.67 0.00
28_P 93_K 0.67 0.00
9_K 167_W 0.66 0.00
9_K 188_L 0.66 0.00
46_C 10_F 0.66 0.00
8_K 52_L 0.66 0.00
45_V 20_S 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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