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OPENSEQ.org
L32 - S07
UniProt: P80339 - P17291
Length: 216
Sequences: 752
Seq/Len: 3.53
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
4kix4kix0 4kiyG 4kiz0 4kj0G 4kj10 4kj2G 4kj30 4kj4GContact Map
4kj54kj50 4kj6G 4kj70 4kj8G 4kj90 4kjaG 4kjb0 4kjcGContact Map
4gd13r8s0 3r8t0 4gd1G 4gd2GContact Map
3ofo3ofoG 3ofpG 3ofq0 3ofr0Contact Map
3i1m3i1mG 3i1n0 3i1oG 3i1p0Contact Map
3ofa3ofaG 3ofbG 3ofc0 3ofd0Contact Map
3sfs3sfsG 3sgf4Contact Map
2qal2qalG 2qam0 2qanG 2qao0Contact Map
2i2p2i2pG 2i2t0 2i2uG 2i2v0Contact Map
3oaq3oaqG 3oarG 3oas0 3oat0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
23_H 4_R 1.09 0.04
5_P 43_F 1.01 0.03
5_P 33_D 0.96 0.03
18_A 134_A 0.95 0.03
16_R 84_N 0.90 0.02
38_A 119_R 0.89 0.02
45_V 107_A 0.87 0.02
42_P 53_K 0.86 0.02
23_H 25_A 0.85 0.02
41_P 61_V 0.83 0.02
57_V 133_G 0.81 0.02
26_T 125_M 0.81 0.02
26_T 76_R 0.79 0.02
22_H 43_F 0.78 0.01
14_A 143_R 0.78 0.01
15_R 39_A 0.77 0.01
9_K 4_R 0.76 0.01
38_A 69_V 0.76 0.01
50_G 85_Y 0.76 0.01
10_K 22_L 0.76 0.01
14_A 80_V 0.75 0.01
9_K 60_K 0.75 0.01
10_K 67_E 0.72 0.01
31_V 45_D 0.72 0.01
7_P 75_V 0.72 0.01
9_K 49_I 0.71 0.01
37_K 43_F 0.71 0.01
31_V 83_A 0.71 0.01
17_D 149_R 0.71 0.01
19_R 140_D 0.70 0.01
47_P 149_R 0.69 0.01
14_A 98_S 0.69 0.01
22_H 30_I 0.69 0.01
55_R 96_Q 0.69 0.01
17_D 23_V 0.68 0.01
30_L 16_L 0.68 0.01
45_V 64_Q 0.68 0.01
18_A 108_A 0.68 0.01
13_K 31_M 0.67 0.01
7_P 76_R 0.67 0.01
58_L 63_K 0.66 0.01
19_R 111_R 0.66 0.01
51_Y 76_R 0.66 0.01
57_V 36_K 0.66 0.01
55_R 58_P 0.65 0.01
4_H 116_A 0.65 0.01
19_R 126_D 0.65 0.01
34_P 46_A 0.64 0.01
10_K 30_I 0.64 0.01
39_M 48_K 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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