May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

KGUA - YICC
UniProt: P60546 - P23839
Length: 494
Sequences: 707
Seq/Len: 1.45
I_Prob: 0.00

KGUA - Guanylate kinase
Paralog alert: 0.30 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: KGUA PHNN
YICC - UPF0701 protein YicC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YICC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_S 8_Y 1.22 0.00
146_I 272_L 1.17 0.00
132_D 109_I 1.02 0.00
163_Y 209_A 1.01 0.00
8_I 260_S 0.99 0.00
53_H 213_D 0.98 0.00
94_A 211_R 0.97 0.00
35_V 228_T 0.97 0.00
11_A 43_R 0.94 0.00
121_I 66_L 0.93 0.00
179_L 188_K 0.93 0.00
79_G 33_E 0.92 0.00
21_I 61_K 0.92 0.00
7_Y 9_A 0.92 0.00
67_S 135_D 0.91 0.00
21_I 227_E 0.91 0.00
26_K 26_S 0.91 0.00
72_L 25_R 0.90 0.00
18_S 213_D 0.90 0.00
86_R 74_A 0.89 0.00
176_L 30_R 0.89 0.00
178_D 179_Q 0.89 0.00
57_V 135_D 0.89 0.00
58_N 164_T 0.88 0.00
154_V 24_M 0.88 0.00
15_A 57_L 0.88 0.00
143_E 143_V 0.88 0.00
78_F 266_T 0.88 0.00
89_I 8_Y 0.88 0.00
105_W 32_L 0.87 0.00
43_Q 168_V 0.87 0.00
22_Q 8_Y 0.87 0.00
102_D 249_F 0.86 0.00
95_T 24_M 0.86 0.00
55_F 76_G 0.86 0.00
163_Y 227_E 0.86 0.00
60_D 81_N 0.86 0.00
35_V 144_A 0.85 0.00
102_D 208_L 0.85 0.00
52_E 141_F 0.85 0.00
37_V 187_A 0.85 0.00
121_I 74_A 0.85 0.00
105_W 278_Q 0.85 0.00
177_T 165_A 0.84 0.00
113_Q 38_L 0.84 0.00
100_F 272_L 0.84 0.00
6_L 115_V 0.84 0.00
81_Y 49_V 0.83 0.00
37_V 84_L 0.83 0.00
70_A 137_T 0.83 0.00
165_Y 243_D 0.83 0.00
105_W 210_Q 0.82 0.00
69_D 15_G 0.82 0.00
102_D 31_Y 0.82 0.00
94_A 165_A 0.82 0.00
111_I 151_A 0.82 0.00
55_F 39_P 0.82 0.00
180_K 95_V 0.81 0.00
98_D 243_D 0.81 0.00
11_A 181_Q 0.81 0.00
52_E 270_I 0.80 0.00
177_T 136_G 0.80 0.00
142_S 120_E 0.80 0.00
87_E 77_E 0.80 0.00
132_D 185_L 0.79 0.00
27_T 133_A 0.79 0.00
102_D 30_R 0.79 0.00
75_A 243_D 0.79 0.00
115_M 260_S 0.78 0.00
66_I 196_L 0.78 0.00
11_A 200_R 0.78 0.00
101_L 31_Y 0.78 0.00
105_W 88_L 0.78 0.00
167_I 34_T 0.78 0.00
102_D 29_Q 0.77 0.00
20_L 175_P 0.77 0.00
52_E 187_A 0.77 0.00
148_K 91_A 0.77 0.00
41_T 10_R 0.77 0.00
24_L 33_E 0.77 0.00
52_E 81_N 0.76 0.00
167_I 231_I 0.76 0.00
192_R 141_F 0.76 0.00
58_N 66_L 0.76 0.00
163_Y 144_A 0.75 0.00
12_P 213_D 0.75 0.00
183_I 158_Q 0.75 0.00
111_I 268_S 0.75 0.00
50_H 93_N 0.75 0.00
57_V 9_A 0.75 0.00
64_E 184_R 0.75 0.00
113_Q 132_A 0.75 0.00
53_H 113_P 0.75 0.00
135_L 213_D 0.74 0.00
108_A 188_K 0.74 0.00
78_F 208_L 0.74 0.00
167_I 42_F 0.74 0.00
78_F 50_R 0.74 0.00
145_V 122_D 0.74 0.00
78_F 272_L 0.74 0.00
71_F 201_L 0.74 0.00
172_F 116_M 0.74 0.00
167_I 87_Q 0.74 0.00
111_I 53_I 0.74 0.00
140_Q 246_M 0.74 0.00
148_K 86_K 0.73 0.00
22_Q 132_A 0.73 0.00
28_Q 54_R 0.73 0.00
59_H 196_L 0.72 0.00
153_A 61_K 0.72 0.00
172_F 120_E 0.72 0.00
130_E 130_I 0.72 0.00
25_L 111_R 0.72 0.00
65_M 132_A 0.72 0.00
139_G 26_S 0.71 0.00
79_G 138_L 0.71 0.00
167_I 183_E 0.71 0.00
3_Q 49_V 0.71 0.00
185_A 66_L 0.71 0.00
65_M 221_L 0.71 0.00
18_S 29_Q 0.71 0.00
61_E 165_A 0.71 0.00
19_S 278_Q 0.71 0.00
111_I 221_L 0.71 0.00
32_D 49_V 0.71 0.00
166_L 195_Q 0.71 0.00
49_V 86_K 0.71 0.00
167_I 90_T 0.71 0.00
99_V 231_I 0.70 0.00
142_S 14_K 0.70 0.00
143_E 286_I 0.70 0.00
129_I 62_V 0.70 0.00
140_Q 43_R 0.70 0.00
99_V 154_A 0.70 0.00
71_F 261_I 0.70 0.00
39_H 240_R 0.70 0.00
34_Q 106_P 0.70 0.00
8_I 74_A 0.70 0.00
37_V 92_A 0.70 0.00
166_L 31_Y 0.70 0.00
33_T 266_T 0.69 0.00
75_A 218_L 0.69 0.00
98_D 250_N 0.69 0.00
116_P 113_P 0.69 0.00
121_I 122_D 0.69 0.00
76_E 280_R 0.69 0.00
89_I 212_I 0.69 0.00
174_T 94_W 0.69 0.00
146_I 89_V 0.69 0.00
101_L 177_I 0.69 0.00
27_T 151_A 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.2808 seconds.