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OPENSEQ.org
L28 - L36
UniProt: P60494 - Q5SHR2
Length: 135
Sequences: 611
Seq/Len: 6.05
I_Prob: 0.08
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d19 3v2f19Contact Map
2j002j0119 2j0319Contact Map
4juw4jux19Contact Map
4kix4kixX4 4kizX4 4kj1X4 4kj3X4Contact Map
4kj54kj5X4 4kj7X4 4kj9X4 4kjbX4Contact Map
2zjr2zjrU4Contact Map
4btc4btd19Contact Map
3v223v2319 3v2519Contact Map
4gd13r8sX4 3r8tX4Contact Map
3knh3kni19 3knk19Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_V 29_N 1.08 0.08
3_K 30_P 0.93 0.05
69_K 18_R 0.91 0.05
50_R 20_H 0.89 0.04
18_I 31_K 0.84 0.04
39_K 10_I 0.83 0.04
3_K 4_R 0.78 0.03
74_V 12_D 0.76 0.03
35_T 10_I 0.69 0.02
42_Q 31_K 0.68 0.02
13_I 16_V 0.68 0.02
74_V 22_R 0.68 0.02
59_T 18_R 0.66 0.02
52_R 27_C 0.66 0.02
48_K 18_R 0.65 0.02
14_V 35_R 0.63 0.02
44_P 10_I 0.63 0.02
15_A 8_K 0.62 0.02
16_N 7_V 0.61 0.01
39_K 35_R 0.60 0.01
16_N 24_Y 0.60 0.01
13_I 4_R 0.60 0.01
59_T 5_A 0.59 0.01
57_E 22_R 0.58 0.01
46_L 21_G 0.57 0.01
10_K 13_K 0.57 0.01
20_R 16_V 0.57 0.01
12_P 31_K 0.57 0.01
3_K 35_R 0.55 0.01
42_Q 28_E 0.55 0.01
12_P 22_R 0.55 0.01
11_R 28_E 0.55 0.01
68_P 31_K 0.54 0.01
9_G 21_G 0.54 0.01
74_V 24_Y 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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