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OPENSEQ.org
L27 - S16
UniProt: P60493 - Q5SJH3
Length: 173
Sequences: 1305
Seq/Len: 7.68
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cP 3v2d0 3v2eP 3v2f0Contact Map
2j002j00P 2j010 2j02P 2j030Contact Map
4juw4juwP 4jux0Contact Map
4kix4kixW 4kiyP 4kizW 4kj0P 4kj1W 4kj2P 4kj3W 4kj4PContact Map
4kj54kj5W 4kj6P 4kj7W 4kj8P 4kj9W 4kjaP 4kjbW 4kjcPContact Map
3uyd3uydS 3uye3 3uyfS 3uyg3Contact Map
4gd13r8sW 3r8tW 4gd1P 4gd2PContact Map
3ohc3ohcP 3ohdP 3ohj0 3ohk0Contact Map
3knh3knhP 3kni0 3knjP 3knk0Contact Map
3ohy3ohyP 3ohz0 3oi0P 3oi10Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_V 21_V 0.82 0.00
6_G 69_T 0.80 0.00
47_P 71_R 0.76 0.00
3_H 12_K 0.75 0.00
61_A 31_K 0.73 0.00
38_V 51_V 0.69 0.00
41_R 25_R 0.69 0.00
6_G 62_V 0.68 0.00
21_L 25_R 0.67 0.00
43_T 59_W 0.63 0.00
46_K 16_H 0.63 0.00
7_L 11_S 0.63 0.00
45_F 81_R 0.61 0.00
8_G 67_T 0.60 0.00
8_G 40_D 0.56 0.00
21_L 65_Q 0.55 0.00
53_M 1_M 0.54 0.00
32_R 73_L 0.54 0.00
32_R 86_E 0.53 0.00
57_F 35_K 0.53 0.00
61_A 65_Q 0.53 0.00
7_L 56_A 0.52 0.00
11_R 67_T 0.52 0.00
38_V 55_R 0.52 0.00
29_Q 2_V 0.51 0.00
61_A 38_Y 0.51 0.00
46_K 38_Y 0.51 0.00
19_K 1_M 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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