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OPENSEQ.org
L27 - L29
UniProt: P60493 - Q5SHP6
Length: 157
Sequences: 1069
Seq/Len: 7.22
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d02 3v2f02Contact Map
2j002j0102 2j0302Contact Map
4juw4jux02Contact Map
4kix4kixWY 4kizWY 4kj1WY 4kj3WYContact Map
4kj54kj5WY 4kj7WY 4kj9WY 4kjbWYContact Map
2zjr2zjrTVContact Map
4btc4btd02Contact Map
3uyd3uye3W 3uyg3WContact Map
4gd13r8sWY 3r8tWYContact Map
3knh3kni02 3knk02Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_E 54_K 0.94 0.01
6_G 26_R 0.80 0.01
6_G 32_L 0.79 0.01
1_M 56_Q 0.77 0.01
37_L 11_E 0.73 0.01
80_H 29_K 0.68 0.01
76_G 61_L 0.67 0.01
49_K 63_V 0.66 0.01
78_Y 54_K 0.65 0.01
15_D 33_M 0.64 0.01
8_G 61_L 0.63 0.01
60_F 37_F 0.62 0.01
38_V 47_N 0.62 0.01
84_L 14_R 0.60 0.01
81_V 36_R 0.59 0.01
18_A 26_R 0.59 0.01
7_L 28_K 0.59 0.01
26_Y 54_K 0.59 0.01
37_L 45_S 0.58 0.01
59_L 39_A 0.58 0.00
76_G 11_E 0.57 0.00
1_M 29_K 0.55 0.00
46_K 46_Q 0.55 0.00
61_A 35_L 0.55 0.00
60_F 35_L 0.54 0.00
7_L 25_V 0.53 0.00
30_V 19_V 0.53 0.00
59_L 41_I 0.53 0.00
50_N 65_N 0.53 0.00
46_K 57_I 0.53 0.00
32_R 39_A 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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