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OPENSEQ.org
L27 - S09
UniProt: P60493 - P80374
Length: 213
Sequences: 1279
Seq/Len: 6.09
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2d0 3v2eI 3v2f0Contact Map
2j002j00I 2j010 2j02I 2j030Contact Map
4juw4juwI 4jux0Contact Map
4kix4kixW 4kiyI 4kizW 4kj0I 4kj1W 4kj2I 4kj3W 4kj4IContact Map
4kj54kj5W 4kj6I 4kj7W 4kj8I 4kj9W 4kjaI 4kjbW 4kjcIContact Map
3uyd3uydL 3uye3 3uyfL 3uyg3Contact Map
4gd13r8sW 3r8tW 4gd1I 4gd2IContact Map
3ohc3ohcI 3ohdI 3ohj0 3ohk0Contact Map
3knh3knhI 3kni0 3knjI 3knk0Contact Map
3ohy3ohyI 3ohz0 3oi0I 3oi10Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_L 61_A 1.01 0.04
37_L 90_P 0.95 0.03
21_L 118_K 0.78 0.02
37_L 114_Y 0.76 0.02
15_D 106_A 0.76 0.02
79_V 12_E 0.72 0.01
38_V 37_F 0.70 0.01
10_T 37_F 0.70 0.01
37_L 70_K 0.69 0.01
60_F 80_G 0.68 0.01
44_R 94_A 0.67 0.01
41_R 118_K 0.66 0.01
19_K 12_E 0.65 0.01
46_K 68_G 0.65 0.01
6_G 6_G 0.64 0.01
83_P 51_R 0.64 0.01
62_L 55_A 0.63 0.01
74_R 109_V 0.63 0.01
59_L 121_R 0.63 0.01
67_V 13_A 0.63 0.01
29_Q 82_A 0.63 0.01
43_T 13_A 0.61 0.01
53_M 14_V 0.61 0.01
25_R 125_Y 0.60 0.01
67_V 28_V 0.60 0.01
76_G 41_V 0.59 0.01
38_V 12_E 0.59 0.01
7_L 65_V 0.58 0.01
74_R 114_Y 0.58 0.01
33_A 98_P 0.57 0.01
41_R 121_R 0.57 0.01
7_L 59_F 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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