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OPENSEQ.org
L27 - L33
UniProt: P60493 - P35871
Length: 139
Sequences: 1009
Seq/Len: 7.31
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d06 3v2f06Contact Map
2j002j0106 2j0306Contact Map
4juw4jux06Contact Map
4kix4kixW1 4kizW1 4kj1W1 4kj3W1Contact Map
4kj54kj5W1 4kj7W1 4kj9W1 4kjbW1Contact Map
2zjr2zjrT1Contact Map
4btc4btd06Contact Map
3uyd3uye36 3uyg36Contact Map
3v223v2306 3v2506Contact Map
4gd13r8sW1 3r8tW1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_D 46_H 1.01 0.03
6_G 52_V 0.90 0.03
38_V 26_N 0.74 0.01
8_G 7_I 0.74 0.01
6_G 12_E 0.68 0.01
84_L 36_L 0.66 0.01
49_K 50_R 0.66 0.01
11_R 25_K 0.63 0.01
7_L 10_L 0.63 0.01
82_R 14_T 0.62 0.01
75_L 7_I 0.61 0.01
6_G 33_K 0.59 0.01
7_L 3_S 0.59 0.01
28_G 14_T 0.57 0.01
44_R 28_R 0.56 0.01
30_V 34_L 0.56 0.01
78_Y 54_I 0.56 0.01
6_G 30_T 0.55 0.01
84_L 48_V 0.54 0.01
45_F 16_C 0.54 0.01
49_K 34_L 0.53 0.01
33_A 36_L 0.52 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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