OPENSEQ.org
L21 - L31
UniProt: P60492 - Q5SJE1
Length: 172
Sequences: 1286
Seq/Len: 7.75
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dV4 3v2fV4Contact Map
2j002j01V4 2j03V4Contact Map
4juw4juxV4Contact Map
4btc4btdV4Contact Map
3uyd3uye24 3uyg24Contact Map
3v223v23V4 3v25V4Contact Map
3uz63uz824 3uz924Contact Map
3knh3kniV4 3knkV4Contact Map
3ohc3ohjV4 3ohkV4Contact Map
3ohy3ohzV4 3oi1V4Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
94_L 33_V 1.01 0.04
66_R 57_E 0.79 0.02
72_V 58_R 0.77 0.02
83_R 24_T 0.76 0.02
2_F 26_S 0.72 0.01
68_K 30_E 0.71 0.01
20_L 21_V 0.69 0.01
35_L 61_R 0.68 0.01
96_I 62_R 0.67 0.01
30_G 1_M 0.65 0.01
73_S 52_T 0.62 0.01
58_V 3_E 0.61 0.01
76_K 34_E 0.59 0.01
33_V 24_T 0.57 0.01
49_T 8_K 0.57 0.01
84_K 34_E 0.56 0.01
78_K 33_V 0.56 0.01
16_P 48_R 0.55 0.01
6_K 57_E 0.55 0.01
64_H 61_R 0.55 0.01
10_K 60_Q 0.55 0.01
56_S 43_Y 0.55 0.01
2_F 56_V 0.54 0.01
60_E 27_T 0.54 0.01
84_K 62_R 0.54 0.01
31_A 50_V 0.53 0.01
7_T 2_K 0.53 0.01
74_K 52_T 0.52 0.01
5_V 15_I 0.52 0.01
38_L 25_Y 0.51 0.01
18_L 21_V 0.51 0.01
67_G 28_K 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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