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OPENSEQ.org
L21 - S10
UniProt: P60492 - Q5SHN7
Length: 206
Sequences: 995
Seq/Len: 4.97
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dV 3v2eJ 3v2fVContact Map
2j002j00J 2j01V 2j02J 2j03VContact Map
4juw4juwJ 4juxVContact Map
4kix4kixR 4kiyJ 4kizR 4kj0J 4kj1R 4kj2J 4kj3R 4kj4JContact Map
4kj54kj5R 4kj6J 4kj7R 4kj8J 4kj9R 4kjaJ 4kjbR 4kjcJContact Map
3uyd3uydM 3uye2 3uyfM 3uyg2Contact Map
4gd13r8sR 3r8tR 4gd1J 4gd2JContact Map
3knh3knhJ 3kniV 3knjJ 3knkVContact Map
3ohc3ohcJ 3ohdJ 3ohjV 3ohkVContact Map
3f1e3f1eJ 3f1fV 3f1gJ 3f1hVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_K 62_H 1.01 0.03
73_S 97_E 0.98 0.03
77_A 96_I 0.90 0.02
73_S 63_F 0.88 0.02
30_G 98_I 0.86 0.02
73_S 51_R 0.85 0.02
35_L 11_F 0.82 0.01
78_K 22_K 0.81 0.01
85_K 7_K 0.80 0.01
64_H 27_A 0.78 0.01
80_Q 53_P 0.76 0.01
81_Y 18_A 0.76 0.01
45_T 38_I 0.75 0.01
46_V 75_I 0.74 0.01
71_L 16_L 0.73 0.01
83_R 34_V 0.69 0.01
91_Y 50_I 0.69 0.01
36_P 100_T 0.69 0.01
28_E 84_Q 0.69 0.01
99_I 64_E 0.68 0.01
84_K 61_E 0.67 0.01
15_E 21_Q 0.67 0.01
4_I 65_L 0.66 0.01
74_K 53_P 0.65 0.01
68_K 91_P 0.64 0.01
83_R 87_T 0.63 0.01
39_L 12_D 0.62 0.01
72_V 30_S 0.62 0.01
82_R 46_R 0.62 0.01
77_A 10_G 0.60 0.01
80_Q 52_G 0.60 0.01
14_V 6_I 0.59 0.01
80_Q 47_F 0.58 0.01
71_L 79_R 0.58 0.01
51_V 26_A 0.57 0.01
42_G 49_V 0.57 0.01
17_G 25_E 0.57 0.01
75_F 46_R 0.57 0.01
93_E 92_T 0.56 0.01
74_K 43_R 0.56 0.01
33_V 61_E 0.56 0.01
5_V 29_R 0.56 0.01
73_S 59_S 0.56 0.01
89_Q 93_G 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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