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OPENSEQ.org
L20 - L29
UniProt: P60491 - Q5SHP6
Length: 190
Sequences: 1018
Seq/Len: 5.62
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dU2 3v2fU2Contact Map
2j002j01U2 2j03U2Contact Map
4juw4juxU2Contact Map
4kix4kixQY 4kizQY 4kj1QY 4kj3QYContact Map
4kj54kj5QY 4kj7QY 4kj9QY 4kjbQYContact Map
2zjr2zjrNVContact Map
4btc4btdU2Contact Map
3uyd3uye1W 3uyg1WContact Map
4gd13r8sQY 3r8tQYContact Map
3knh3kniU2 3knkU2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_H 43_Q 0.87 0.00
91_D 56_Q 0.86 0.00
90_V 15_K 0.81 0.00
14_H 25_V 0.80 0.00
102_E 65_N 0.74 0.00
45_Y 59_R 0.71 0.00
24_Y 46_Q 0.71 0.00
25_W 60_L 0.70 0.00
39_L 28_K 0.69 0.00
79_F 63_V 0.68 0.00
93_K 14_R 0.67 0.00
93_K 38_Q 0.66 0.00
53_R 56_Q 0.65 0.00
87_G 37_F 0.65 0.00
110_V 51_R 0.65 0.00
11_R 54_K 0.64 0.00
91_D 16_L 0.63 0.00
41_A 67_K 0.63 0.00
74_L 20_E 0.62 0.00
46_A 61_L 0.61 0.00
32_F 39_A 0.61 0.00
32_F 43_Q 0.61 0.00
109_L 53_L 0.60 0.00
88_I 26_R 0.59 0.00
63_V 40_S 0.59 0.00
91_D 32_L 0.59 0.00
10_R 41_I 0.59 0.00
8_V 25_V 0.58 0.00
28_R 54_K 0.58 0.00
100_V 38_Q 0.57 0.00
75_N 47_N 0.57 0.00
28_R 55_R 0.56 0.00
101_R 34_E 0.56 0.00
11_R 12_E 0.56 0.00
26_G 51_R 0.55 0.00
98_L 46_Q 0.54 0.00
53_R 12_E 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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