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OPENSEQ.org

L20 - L33
UniProt: P60491 - P35871
Length: 172
Sequences: 1080
Seq/Len: 6.39
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dU6 3v2fU6Contact Map
2j002j01U6 2j03U6Contact Map
4juw4juxU6Contact Map
4kix4kixQ1 4kizQ1 4kj1Q1 4kj3Q1Contact Map
4kj54kj5Q1 4kj7Q1 4kj9Q1 4kjbQ1Contact Map
2zjr2zjrN1Contact Map
4btc4btdU6Contact Map
3uyd3uye16 3uyg16Contact Map
3v223v23U6 3v25U6Contact Map
4gd13r8sQ1 3r8tQ1Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_L 33_K 0.73 0.00
49_H 22_A 0.73 0.00
25_W 27_K 0.72 0.00
40_F 12_E 0.71 0.00
115_A 36_L 0.70 0.00
96_A 37_R 0.67 0.00
22_K 14_T 0.65 0.00
77_S 35_E 0.65 0.00
14_H 20_N 0.61 0.00
68_A 30_T 0.60 0.00
48_A 22_A 0.60 0.00
91_D 29_N 0.59 0.00
21_A 32_N 0.59 0.00
82_G 32_N 0.58 0.00
98_L 45_K 0.58 0.00
7_G 27_K 0.57 0.00
15_K 53_K 0.57 0.00
74_L 52_V 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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