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OPENSEQ.org
L19 - L35
UniProt: P60490 - Q5SKU1
Length: 211
Sequences: 1090
Seq/Len: 6.06
I_Prob: 0.38
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dT8 3v2fT8Contact Map
2j002j01T8 2j03T8Contact Map
4juw4juxT8Contact Map
4kix4kixP3 4kizP3 4kj1P3 4kj3P3Contact Map
4kj54kj5P3 4kj7P3 4kj9P3 4kjbP3Contact Map
2zjr2zjrM3Contact Map
4btc4btdT8Contact Map
3uyd3uyeR8 3uygR8Contact Map
3v223v23T8 3v25T8Contact Map
4gd13r8sP3 3r8tP3Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_F 8_K 1.24 0.38
70_V 30_R 1.19 0.34
42_I 40_E 0.95 0.17
65_K 38_G 0.90 0.14
28_V 49_V 0.89 0.14
82_L 48_F 0.88 0.13
53_R 60_L 0.86 0.12
62_T 17_T 0.78 0.09
24_P 26_K 0.74 0.07
54_R 63_P 0.73 0.07
55_N 10_A 0.72 0.07
9_L 22_V 0.71 0.07
48_I 57_R 0.71 0.07
64_R 12_K 0.69 0.06
23_R 56_E 0.69 0.06
94_A 17_T 0.66 0.05
65_K 34_W 0.66 0.05
35_K 29_K 0.65 0.05
75_I 4_M 0.64 0.05
20_P 2_P 0.63 0.05
65_K 46_R 0.63 0.04
81_P 17_T 0.61 0.04
30_V 11_K 0.61 0.04
110_I 8_K 0.61 0.04
40_T 7_H 0.61 0.04
53_R 57_R 0.61 0.04
40_T 26_K 0.61 0.04
96_R 4_M 0.60 0.04
60_T 27_T 0.60 0.04
9_L 55_A 0.59 0.04
61_F 34_W 0.59 0.04
61_F 61_L 0.58 0.04
65_K 60_L 0.58 0.04
116_A 57_R 0.57 0.03
113_K 32_L 0.57 0.03
102_I 14_V 0.56 0.03
39_R 50_L 0.56 0.03
113_K 44_K 0.56 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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