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OPENSEQ.org
L19 - S08
UniProt: P60490 - Q5SHQ2
Length: 284
Sequences: 1179
Seq/Len: 4.77
I_Prob: 0.22
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dT 3v2eH 3v2fTContact Map
2j002j00H 2j01T 2j02H 2j03TContact Map
4juw4juwH 4juxTContact Map
4kix4kixP 4kiyH 4kizP 4kj0H 4kj1P 4kj2H 4kj3P 4kj4HContact Map
4kj54kj5P 4kj6H 4kj7P 4kj8H 4kj9P 4kjaH 4kjbP 4kjcHContact Map
3uyd3uydK 3uyeR 3uyfK 3uygRContact Map
4gd13r8sP 3r8tP 4gd1H 4gd2HContact Map
3knh3knhH 3kniT 3knjH 3knkTContact Map
3ohc3ohcH 3ohdH 3ohjT 3ohkTContact Map
3f1e3f1eH 3f1fT 3f1gH 3f1hTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_K 76_P 1.19 0.22
96_R 90_G 1.04 0.14
51_R 35_I 0.98 0.12
70_V 115_S 0.90 0.09
78_L 95_V 0.89 0.09
6_L 105_R 0.87 0.08
46_E 133_L 0.85 0.07
105_L 23_S 0.84 0.07
35_K 37_R 0.81 0.06
50_I 86_I 0.81 0.06
5_A 137_V 0.79 0.06
32_Y 91_R 0.77 0.05
88_I 30_R 0.77 0.05
12_S 112_L 0.75 0.05
65_K 129_V 0.75 0.05
96_R 3_T 0.75 0.05
62_T 27_P 0.74 0.05
82_L 19_V 0.74 0.05
65_K 105_R 0.73 0.05
34_V 21_K 0.73 0.05
27_T 133_L 0.70 0.04
113_K 99_E 0.69 0.04
7_I 98_K 0.69 0.04
40_T 118_V 0.69 0.04
114_L 2_L 0.69 0.04
65_K 53_V 0.69 0.04
80_S 63_L 0.69 0.04
65_K 120_T 0.68 0.04
78_L 13_I 0.68 0.04
21_E 126_K 0.66 0.03
90_Q 65_Y 0.66 0.03
89_V 138_W 0.65 0.03
45_F 82_H 0.65 0.03
28_V 123_E 0.65 0.03
105_L 76_P 0.65 0.03
83_I 7_A 0.64 0.03
57_F 42_E 0.63 0.03
82_L 86_I 0.63 0.03
75_I 101_P 0.63 0.03
48_I 134_I 0.62 0.03
23_R 76_P 0.62 0.03
66_V 96_G 0.61 0.03
79_H 9_M 0.61 0.03
51_R 100_I 0.60 0.03
53_R 77_E 0.60 0.03
39_R 80_I 0.60 0.03
7_I 119_L 0.60 0.03
58_N 60_R 0.60 0.03
10_V 77_E 0.59 0.03
50_I 112_L 0.59 0.03
12_S 81_H 0.59 0.03
22_F 29_S 0.59 0.03
87_D 34_E 0.59 0.02
59_T 17_T 0.58 0.02
84_Q 111_I 0.58 0.02
66_V 85_R 0.58 0.02
100_Y 17_T 0.58 0.02
28_V 41_R 0.57 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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