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OPENSEQ.org
L19 - S14
UniProt: P60490 - Q5SHQ1
Length: 207
Sequences: 1070
Seq/Len: 6.04
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dT 3v2eN 3v2fTContact Map
2j002j00N 2j01T 2j02N 2j03TContact Map
4juw4juwN 4juxTContact Map
3uyd3uydQ 3uyeR 3uyfQ 3uygRContact Map
3knh3knhN 3kniT 3knjN 3knkTContact Map
3ohc3ohcN 3ohdN 3ohjT 3ohkTContact Map
3ohy3ohyN 3ohzT 3oi0N 3oi1TContact Map
3f1e3f1eN 3f1fT 3f1gN 3f1hTContact Map
3v223v22N 3v23T 3v24N 3v25TContact Map
3uz63uz6Q 3uz7Q 3uz8R 3uz9RContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
62_T 33_V 0.82 0.00
5_A 18_V 0.81 0.00
6_L 8_E 0.77 0.00
65_K 10_A 0.73 0.00
96_R 56_V 0.73 0.00
65_K 25_V 0.70 0.00
49_V 48_A 0.69 0.00
75_I 33_V 0.69 0.00
114_L 30_A 0.68 0.00
109_E 12_R 0.68 0.00
90_Q 31_R 0.67 0.00
93_R 44_L 0.66 0.00
21_E 57_R 0.63 0.00
46_E 31_R 0.62 0.00
14_Y 31_R 0.61 0.00
53_R 47_L 0.61 0.00
57_F 52_Q 0.61 0.00
35_K 59_A 0.61 0.00
52_I 57_R 0.60 0.00
108_R 40_C 0.59 0.00
100_Y 10_A 0.59 0.00
29_R 40_C 0.58 0.00
76_F 30_A 0.58 0.00
88_I 59_A 0.58 0.00
53_R 31_R 0.58 0.00
12_S 4_K 0.57 0.00
45_F 42_I 0.56 0.00
93_R 57_R 0.56 0.00
37_G 51_G 0.56 0.00
11_E 26_R 0.55 0.00
116_A 53_L 0.55 0.00
111_R 35_R 0.55 0.00
60_T 53_L 0.55 0.00
59_T 36_F 0.55 0.00
39_R 57_R 0.54 0.00
54_R 39_L 0.54 0.00
38_N 49_H 0.54 0.00
92_G 51_G 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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