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OPENSEQ.org
L19 - L34
UniProt: P60490 - P80340
Length: 195
Sequences: 882
Seq/Len: 5.48
I_Prob: 0.43
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dT7 3v2fT7Contact Map
2j002j01T7 2j03T7Contact Map
4juw4juxT7Contact Map
4kix4kixP2 4kizP2 4kj1P2 4kj3P2Contact Map
4kj54kj5P2 4kj7P2 4kj9P2 4kjbP2Contact Map
2zjr2zjrM2Contact Map
4btc4btdT7Contact Map
3uyd3uyeR7 3uygR7Contact Map
3v223v23T7 3v25T7Contact Map
4gd13r8sP2 3r8tP2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_K 36_Q 1.27 0.43
83_I 11_K 0.92 0.16
28_V 26_G 0.90 0.15
7_I 43_T 0.86 0.13
56_G 28_R 0.78 0.10
65_K 19_R 0.77 0.09
20_P 16_H 0.77 0.09
79_H 10_R 0.75 0.09
115_R 41_R 0.75 0.09
32_Y 30_V 0.72 0.07
23_R 32_K 0.71 0.07
58_N 5_W 0.71 0.07
113_K 15_T 0.71 0.07
76_F 3_R 0.71 0.07
22_F 44_P 0.70 0.07
46_E 14_K 0.69 0.07
12_S 14_K 0.68 0.06
24_P 2_K 0.68 0.06
33_K 40_W 0.68 0.06
14_Y 25_P 0.66 0.06
70_V 31_L 0.66 0.06
21_E 12_R 0.66 0.06
48_I 25_P 0.66 0.06
12_S 37_K 0.65 0.05
75_I 15_T 0.64 0.05
51_R 8_N 0.63 0.05
17_T 41_R 0.63 0.05
42_I 12_R 0.63 0.05
70_V 20_A 0.62 0.05
34_V 28_R 0.61 0.04
93_R 14_K 0.60 0.04
51_R 15_T 0.60 0.04
90_Q 30_V 0.60 0.04
62_T 23_R 0.59 0.04
6_L 20_A 0.59 0.04
8_K 24_T 0.59 0.04
65_K 8_N 0.58 0.04
96_R 33_R 0.58 0.04
53_R 11_K 0.57 0.04
7_I 33_R 0.57 0.04
46_E 29_K 0.57 0.04
60_T 19_R 0.57 0.04
15_V 41_R 0.57 0.04
90_Q 37_K 0.57 0.04
79_H 14_K 0.57 0.04
49_V 37_K 0.57 0.04
96_R 11_K 0.56 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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