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OPENSEQ.org
L19 - L21
UniProt: P60490 - P60492
Length: 247
Sequences: 1241
Seq/Len: 5.72
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dTV 3v2fTVContact Map
2j002j01TV 2j03TVContact Map
4juw4juxTVContact Map
4kix4kixPR 4kizPR 4kj1PR 4kj3PRContact Map
4kj54kj5PR 4kj7PR 4kj9PR 4kjbPRContact Map
2zjr2zjrMOContact Map
4btc4btdTVContact Map
3uyd3uyeR2 3uygR2Contact Map
3v223v23TV 3v25TVContact Map
4gd13r8sPR 3r8tPRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_K 77_A 0.72 0.00
88_I 52_V 0.72 0.00
60_T 76_K 0.69 0.00
6_L 66_R 0.66 0.00
75_I 66_R 0.66 0.00
110_I 59_A 0.65 0.00
58_N 79_V 0.65 0.00
56_G 38_L 0.64 0.00
83_I 39_L 0.64 0.00
114_L 64_H 0.64 0.00
51_R 96_I 0.63 0.00
88_I 36_P 0.63 0.00
70_V 55_A 0.62 0.00
34_V 68_K 0.62 0.00
79_H 85_K 0.62 0.00
17_T 12_Y 0.61 0.00
96_R 22_V 0.61 0.00
106_S 94_L 0.60 0.00
66_V 45_T 0.60 0.00
49_V 22_V 0.60 0.00
45_F 16_P 0.60 0.00
70_V 78_K 0.60 0.00
21_E 53_E 0.60 0.00
9_L 49_T 0.59 0.00
97_A 32_T 0.59 0.00
21_E 98_E 0.59 0.00
45_F 52_V 0.58 0.00
29_R 72_V 0.58 0.00
88_I 31_A 0.58 0.00
63_V 4_I 0.57 0.00
23_R 91_Y 0.57 0.00
87_D 55_A 0.56 0.00
110_I 73_S 0.56 0.00
20_P 92_T 0.55 0.00
34_V 64_H 0.55 0.00
46_E 10_K 0.54 0.00
104_N 67_G 0.54 0.00
51_R 76_K 0.53 0.00
44_D 5_V 0.53 0.00
10_V 95_L 0.53 0.00
76_F 79_V 0.53 0.00
69_G 17_G 0.53 0.00
93_R 68_K 0.53 0.00
91_R 70_I 0.53 0.00
39_R 48_G 0.53 0.00
109_E 22_V 0.52 0.00
100_Y 40_L 0.52 0.00
106_S 96_I 0.51 0.00
75_I 48_G 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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