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OPENSEQ.org
L16 - L17
UniProt: P60489 - Q9Z9H5
Length: 259
Sequences: 1087
Seq/Len: 4.25
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQR 3v2fQRContact Map
2j002j01QR 2j03QRContact Map
4juw4juxQRContact Map
4kix4kixMN 4kizMN 4kj1MN 4kj3MNContact Map
4kj54kj5MN 4kj7MN 4kj9MN 4kjbMNContact Map
2zjr2zjrJKContact Map
4btc4btdQRContact Map
3uyd3uyeP0 3uygP0Contact Map
4gd13r8sMN 3r8tMNContact Map
3ohc3ohjQR 3ohkQRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_V 40_K 1.06 0.04
130_K 22_R 0.81 0.02
35_V 32_G 0.81 0.02
31_D 99_K 0.78 0.02
37_L 95_T 0.75 0.01
64_I 106_G 0.74 0.01
128_K 18_L 0.72 0.01
7_M 100_L 0.72 0.01
59_R 30_T 0.71 0.01
76_K 7_G 0.70 0.01
118_L 8_R 0.69 0.01
42_I 86_R 0.69 0.01
3_M 9_K 0.69 0.01
33_G 18_L 0.69 0.01
23_G 58_G 0.69 0.01
29_F 45_R 0.68 0.01
85_K 5_K 0.67 0.01
134_R 39_P 0.67 0.01
3_M 23_N 0.66 0.01
20_A 25_A 0.64 0.01
27_V 63_R 0.64 0.01
106_V 27_S 0.64 0.01
37_L 13_H 0.63 0.01
29_F 25_A 0.62 0.01
61_G 114_V 0.62 0.01
115_M 76_V 0.62 0.01
75_T 9_K 0.62 0.01
102_V 99_K 0.62 0.01
24_G 39_P 0.62 0.01
35_V 48_V 0.61 0.01
122_G 20_L 0.60 0.01
5_R 82_E 0.60 0.01
132_V 84_A 0.59 0.01
49_A 26_K 0.59 0.01
26_Y 85_P 0.59 0.01
36_A 89_D 0.59 0.01
130_K 117_V 0.59 0.01
100_G 55_A 0.59 0.01
18_K 89_D 0.59 0.01
134_R 73_V 0.59 0.01
102_V 61_H 0.59 0.01
49_A 72_D 0.58 0.01
121_A 38_V 0.58 0.01
132_V 40_K 0.58 0.01
44_A 90_R 0.58 0.01
133_R 84_A 0.57 0.01
83_M 108_G 0.57 0.01
54_M 98_L 0.57 0.01
11_K 31_H 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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