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OPENSEQ.org
L13 - L30
UniProt: P60488 - Q5SHQ6
Length: 200
Sequences: 984
Seq/Len: 4.92
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoJWContact Map
1vq81vq8JWContact Map
1vqp1vqpJWContact Map
1vqm1vqmJWContact Map
1vql1vqlJWContact Map
1vqk1vqkJWContact Map
1yhq1yhqJWContact Map
1s721s72JWContact Map
1vq91vq9JWContact Map
1vqn1vqnJWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_H 23_L 0.68 0.00
40_P 18_D 0.67 0.00
83_K 15_Y 0.67 0.00
23_L 57_E 0.64 0.00
42_W 18_D 0.59 0.00
88_E 32_Q 0.59 0.00
79_P 41_P 0.59 0.00
75_Y 18_D 0.57 0.00
115_R 21_A 0.57 0.00
87_L 8_L 0.57 0.00
11_P 14_G 0.57 0.00
30_I 51_A 0.56 0.00
15_L 51_A 0.56 0.00
98_V 6_V 0.56 0.00
61_R 49_K 0.55 0.00
131_Q 58_V 0.55 0.00
20_G 3_R 0.55 0.00
52_V 4_L 0.55 0.00
22_T 9_V 0.55 0.00
27_A 37_L 0.54 0.00
28_T 1_M 0.54 0.00
20_G 36_V 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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