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OPENSEQ.org
L13 - L27
UniProt: P60488 - P60493
Length: 225
Sequences: 1373
Seq/Len: 6.13
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dN0 3v2fN0Contact Map
2j002j01N0 2j03N0Contact Map
4juw4juxN0Contact Map
4kix4kixJW 4kizJW 4kj1JW 4kj3JWContact Map
4kj54kj5JW 4kj7JW 4kj9JW 4kjbJWContact Map
2zjr2zjrGTContact Map
4btc4btdN0Contact Map
3uyd3uyeM3 3uygM3Contact Map
4gd13r8sJW 3r8tJWContact Map
3ohc3ohjN0 3ohkN0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
129_P 32_R 0.78 0.00
33_L 6_G 0.77 0.00
82_L 7_L 0.71 0.00
19_E 26_Y 0.70 0.00
82_L 6_G 0.70 0.00
84_K 17_Q 0.64 0.00
131_Q 29_Q 0.63 0.00
38_H 11_R 0.63 0.00
121_K 23_V 0.63 0.00
140_V 46_K 0.63 0.00
67_L 7_L 0.63 0.00
115_R 82_R 0.59 0.00
10_E 49_K 0.59 0.00
137_K 62_L 0.57 0.00
77_G 46_K 0.57 0.00
4_Y 72_R 0.57 0.00
87_L 38_V 0.56 0.00
33_L 7_L 0.55 0.00
131_Q 32_R 0.55 0.00
124_A 33_A 0.55 0.00
6_P 63_V 0.54 0.00
117_F 77_R 0.53 0.00
129_P 18_A 0.53 0.00
94_H 55_R 0.53 0.00
58_D 37_L 0.53 0.00
14_V 32_R 0.53 0.00
39_R 33_A 0.53 0.00
102_A 11_R 0.52 0.00
97_R 69_F 0.52 0.00
110_G 30_V 0.52 0.00
28_T 64_D 0.51 0.00
8_Q 7_L 0.51 0.00
107_L 59_L 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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