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OPENSEQ.org
L02 - L36
UniProt: P60405 - Q5SHR2
Length: 313
Sequences: 810
Seq/Len: 2.60
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dD9 3v2fD9Contact Map
2j002j01D9 2j03D9Contact Map
4juw4juxD9Contact Map
4kix4kixC4 4kizC4 4kj1C4 4kj3C4Contact Map
4kj54kj5C4 4kj7C4 4kj9C4 4kjbC4Contact Map
2zjr2zjrA4Contact Map
4btc4btdD9Contact Map
4gd13r8sC4 3r8tC4Contact Map
3knh3kniD9 3knkD9Contact Map
3v223v23D9 3v25D9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
214_W 10_I 0.97 0.00
155_L 28_E 0.94 0.00
53_F 37_G 0.90 0.00
36_P 25_V 0.88 0.00
170_G 17_I 0.88 0.00
173_V 31_K 0.86 0.00
161_T 20_H 0.84 0.00
60_R 18_R 0.82 0.00
156_A 12_D 0.80 0.00
16_M 18_R 0.78 0.00
247_A 10_I 0.73 0.00
78_K 35_R 0.73 0.00
176_R 5_A 0.73 0.00
10_T 15_K 0.71 0.00
249_P 32_H 0.71 0.00
250_W 32_H 0.70 0.00
89_S 9_R 0.70 0.00
4_K 22_R 0.69 0.00
172_Y 24_Y 0.69 0.00
92_I 29_N 0.69 0.00
193_V 10_I 0.69 0.00
205_V 5_A 0.69 0.00
271_I 28_E 0.68 0.00
167_G 18_R 0.68 0.00
249_P 11_C 0.65 0.00
34_V 25_V 0.64 0.00
7_K 5_A 0.64 0.00
36_P 23_V 0.64 0.00
165_I 31_K 0.64 0.00
249_P 27_C 0.63 0.00
195_A 20_H 0.63 0.00
125_I 32_H 0.63 0.00
186_H 4_R 0.63 0.00
145_V 30_P 0.63 0.00
241_P 24_Y 0.63 0.00
82_I 29_N 0.62 0.00
109_D 8_K 0.62 0.00
96_H 18_R 0.61 0.00
15_F 31_K 0.61 0.00
250_W 11_C 0.61 0.00
145_V 9_R 0.61 0.00
153_A 9_R 0.60 0.00
81_A 10_I 0.60 0.00
37_L 28_E 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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