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OPENSEQ.org
L02 - L21
UniProt: P60405 - P60492
Length: 377
Sequences: 1147
Seq/Len: 3.04
I_Prob: 0.38
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dDV 3v2fDVContact Map
2j002j01DV 2j03DVContact Map
4juw4juxDVContact Map
4kix4kixCR 4kizCR 4kj1CR 4kj3CRContact Map
4kj54kj5CR 4kj7CR 4kj9CR 4kjbCRContact Map
2zjr2zjrAOContact Map
4btc4btdDVContact Map
3uyd3uyeD2 3uygD2Contact Map
4gd13r8sCR 3r8tCRContact Map
3knh3kniDV 3knkDVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
255_K 78_K 1.34 0.38
255_K 77_A 0.94 0.12
262_R 4_I 0.92 0.11
202_K 5_V 0.88 0.10
215_L 80_Q 0.83 0.08
262_R 94_L 0.72 0.05
11_P 46_V 0.72 0.05
225_A 7_T 0.70 0.05
249_P 8_G 0.70 0.04
214_W 80_Q 0.69 0.04
215_L 82_R 0.69 0.04
150_K 54_G 0.69 0.04
15_F 72_V 0.69 0.04
225_A 75_F 0.69 0.04
89_S 79_V 0.68 0.04
242_R 78_K 0.68 0.04
106_I 21_R 0.67 0.04
158_A 26_D 0.66 0.04
267_S 4_I 0.66 0.04
76_P 63_G 0.66 0.04
269_F 4_I 0.66 0.04
34_V 4_I 0.66 0.04
167_G 2_F 0.65 0.04
142_V 61_V 0.65 0.04
253_Q 35_L 0.65 0.04
174_I 4_I 0.65 0.04
217_R 52_V 0.65 0.04
200_D 94_L 0.64 0.03
81_A 30_G 0.64 0.03
75_I 44_K 0.64 0.03
10_T 75_F 0.63 0.03
164_Q 25_L 0.63 0.03
26_K 93_E 0.63 0.03
64_I 25_L 0.63 0.03
127_V 47_V 0.61 0.03
51_V 64_H 0.61 0.03
77_A 62_L 0.61 0.03
240_A 82_R 0.61 0.03
168_R 54_G 0.61 0.03
245_P 30_G 0.60 0.03
163_A 81_Y 0.60 0.03
11_P 20_L 0.59 0.03
196_V 38_L 0.59 0.03
177_L 77_A 0.59 0.03
117_V 99_I 0.58 0.03
6_F 73_S 0.58 0.03
138_V 49_T 0.57 0.03
264_K 74_K 0.57 0.03
212_S 35_L 0.57 0.02
241_P 77_A 0.57 0.02
215_L 73_S 0.57 0.02
95_L 94_L 0.57 0.02
221_V 40_L 0.56 0.02
263_R 56_S 0.56 0.02
117_V 51_V 0.56 0.02
168_R 39_L 0.55 0.02
195_A 96_I 0.55 0.02
187_G 81_Y 0.55 0.02
147_L 25_L 0.55 0.02
36_P 22_V 0.55 0.02
145_V 90_P 0.55 0.02
58_H 80_Q 0.54 0.02
162_S 78_K 0.54 0.02
73_V 20_L 0.53 0.02
15_F 58_V 0.53 0.02
9_Y 79_V 0.53 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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