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OPENSEQ.org

YBFI - YHBU
UniProt: P39901 - P45527
Length: 396
Sequences: 240
Seq/Len: 0.62
I_Prob: 0.00

YBFI - Putative uncharacterized protein YbfI
Paralog alert: 0.90 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: YBFI
YHBU - Uncharacterized protease YhbU
Paralog alert: 0.72 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: YDCP YEGQ YHBU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_I 140_L 1.42 0.00
36_M 164_A 1.30 0.00
20_M 93_I 1.09 0.00
56_E 147_H 1.06 0.00
14_L 134_D 1.05 0.00
54_I 290_Q 0.99 0.00
14_L 287_V 0.95 0.00
13_Y 260_E 0.95 0.00
45_Q 45_K 0.94 0.00
7_C 61_L 0.93 0.00
10_I 89_A 0.92 0.00
6_V 241_E 0.91 0.00
20_M 290_Q 0.89 0.00
59_I 50_A 0.89 0.00
44_E 79_R 0.88 0.00
28_H 158_V 0.87 0.00
34_N 60_K 0.86 0.00
41_Q 68_F 0.86 0.00
44_E 86_Q 0.85 0.00
63_F 269_V 0.85 0.00
36_M 79_R 0.84 0.00
15_C 19_N 0.84 0.00
10_I 99_M 0.84 0.00
53_F 293_D 0.84 0.00
42_K 14_K 0.83 0.00
39_L 160_L 0.83 0.00
43_L 61_L 0.82 0.00
43_L 58_R 0.82 0.00
25_A 65_I 0.81 0.00
29_S 43_T 0.80 0.00
57_T 269_V 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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