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OPENSEQ.org
L33 - S10
UniProt: P35871 - Q5SHN7
Length: 159
Sequences: 623
Seq/Len: 4.10
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2d6 3v2eJ 3v2f6Contact Map
2j002j00J 2j016 2j02J 2j036Contact Map
4juw4juwJ 4jux6Contact Map
4kix4kix1 4kiyJ 4kiz1 4kj0J 4kj11 4kj2J 4kj31 4kj4JContact Map
4kj54kj51 4kj6J 4kj71 4kj8J 4kj91 4kjaJ 4kjb1 4kjcJContact Map
3uyd3uydM 3uye6 3uyfM 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1J 4gd2JContact Map
3knh3knhJ 3kni6 3knjJ 3knk6Contact Map
3ohc3ohcJ 3ohdJ 3ohj6 3ohk6Contact Map
3ohy3ohyJ 3ohz6 3oi0J 3oi16Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_R 49_V 1.07 0.05
44_R 92_T 1.03 0.04
33_K 44_V 1.01 0.04
7_I 16_L 0.95 0.03
26_N 4_I 0.95 0.03
8_K 56_H 0.94 0.03
22_A 47_F 0.89 0.03
44_R 71_L 0.87 0.03
45_K 96_I 0.86 0.02
33_K 96_I 0.84 0.02
18_R 53_P 0.83 0.02
12_E 93_G 0.81 0.02
50_R 89_D 0.78 0.02
49_H 13_H 0.77 0.02
8_K 52_G 0.75 0.02
37_R 83_E 0.75 0.02
50_R 80_K 0.75 0.02
8_K 49_V 0.74 0.02
2_A 3_K 0.72 0.01
6_R 3_K 0.72 0.01
50_R 54_F 0.72 0.01
54_I 71_L 0.71 0.01
28_R 7_K 0.70 0.01
46_H 34_V 0.70 0.01
22_A 18_A 0.69 0.01
35_E 34_V 0.69 0.01
8_K 55_K 0.69 0.01
11_L 28_R 0.69 0.01
32_N 55_K 0.68 0.01
4_E 15_T 0.68 0.01
34_L 25_E 0.67 0.01
54_I 69_N 0.66 0.01
34_L 10_G 0.66 0.01
32_N 33_Q 0.66 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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