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OPENSEQ.org
L33 - S12
UniProt: P35871 - Q5SHN3
Length: 186
Sequences: 667
Seq/Len: 3.77
I_Prob: 0.08
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2d6 3v2eL 3v2f6Contact Map
2j002j00L 2j016 2j02L 2j036Contact Map
4juw4juwL 4jux6Contact Map
4kix4kix1 4kiyL 4kiz1 4kj0L 4kj11 4kj2L 4kj31 4kj4LContact Map
4kj54kj51 4kj6L 4kj71 4kj8L 4kj91 4kjaL 4kjb1 4kjcLContact Map
3uyd3uydO 3uye6 3uyfO 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1L 4gd2LContact Map
3ohc3ohcL 3ohdL 3ohj6 3ohk6Contact Map
3knh3knhL 3kni6 3knjL 3knk6Contact Map
3ohy3ohyL 3ohz6 3oi0L 3oi16Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_I 82_I 1.13 0.08
29_N 65_A 1.11 0.08
5_V 59_S 1.09 0.07
22_A 36_V 0.97 0.05
53_K 21_V 0.96 0.05
3_S 30_R 0.95 0.05
52_V 56_R 0.89 0.04
46_H 34_C 0.88 0.04
17_K 11_G 0.86 0.03
31_P 98_V 0.85 0.03
42_W 70_E 0.84 0.03
12_E 101_V 0.83 0.03
33_K 41_T 0.82 0.03
32_N 125_A 0.82 0.03
45_K 16_R 0.80 0.03
34_L 109_D 0.80 0.03
53_K 82_I 0.79 0.03
22_A 38_R 0.77 0.03
53_K 8_V 0.76 0.02
27_K 5_N 0.75 0.02
32_N 15_V 0.72 0.02
31_P 19_S 0.71 0.02
30_T 30_R 0.71 0.02
26_N 93_V 0.70 0.02
30_T 98_V 0.70 0.02
44_R 58_T 0.69 0.02
47_T 74_L 0.69 0.02
53_K 4_I 0.69 0.02
53_K 34_C 0.68 0.02
20_N 5_N 0.68 0.02
50_R 35_T 0.68 0.02
23_T 58_T 0.68 0.02
7_I 79_V 0.66 0.02
48_V 13_E 0.66 0.02
29_N 20_K 0.66 0.02
37_R 104_A 0.66 0.02
19_R 59_S 0.64 0.01
54_I 64_T 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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