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OPENSEQ.org
L33 - S11
UniProt: P35871 - P80376
Length: 183
Sequences: 836
Seq/Len: 4.67
I_Prob: 0.68
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2d6 3v2eK 3v2f6Contact Map
2j002j00K 2j016 2j02K 2j036Contact Map
4juw4juwK 4jux6Contact Map
4kix4kix1 4kiyK 4kiz1 4kj0K 4kj11 4kj2K 4kj31 4kj4KContact Map
4kj54kj51 4kj6K 4kj71 4kj8K 4kj91 4kjaK 4kjb1 4kjcKContact Map
3uyd3uydN 3uye6 3uyfN 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1K 4gd2KContact Map
3knh3knhK 3kni6 3knjK 3knk6Contact Map
3ohc3ohcK 3ohdK 3ohj6 3ohk6Contact Map
3f1e3f1eK 3f1f6 3f1gK 3f1h6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_N 78_Q 1.39 0.68
39_Y 69_A 1.12 0.42
33_K 122_K 1.09 0.40
12_E 127_K 1.03 0.34
31_P 85_R 0.89 0.21
46_H 34_D 0.83 0.17
29_N 83_I 0.80 0.15
28_R 10_V 0.79 0.15
34_L 6_S 0.77 0.14
33_K 104_Q 0.77 0.14
50_R 26_N 0.76 0.13
8_K 78_Q 0.75 0.12
16_C 34_D 0.75 0.12
22_A 82_V 0.74 0.12
48_V 45_G 0.72 0.11
46_H 31_T 0.72 0.11
5_V 59_Y 0.71 0.10
30_T 15_A 0.71 0.10
53_K 47_V 0.71 0.10
48_V 4_K 0.69 0.10
23_T 29_I 0.69 0.09
27_K 59_Y 0.67 0.09
33_K 52_G 0.67 0.09
48_V 2_A 0.67 0.09
48_V 30_V 0.67 0.09
36_L 51_K 0.66 0.08
18_R 22_H 0.66 0.08
17_K 47_V 0.66 0.08
37_R 119_C 0.65 0.08
45_K 6_S 0.64 0.07
12_E 73_M 0.63 0.07
36_L 95_I 0.63 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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