May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

THIE - THIG
UniProt: P30137 - P30139
Length: 467
Sequences: 612
Seq/Len: 1.36
I_Prob: 0.00

THIE - Thiamine-phosphate synthase
Paralog alert: 0.31 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: THIE
THIG - Thiazole synthase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: THIG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
184_A 13_L 1.09 0.00
109_T 51_N 1.03 0.00
133_P 94_L 1.01 0.00
25_I 217_A 1.00 0.00
97_A 125_V 1.00 0.00
151_R 153_A 0.99 0.00
97_A 79_I 0.98 0.00
147_E 8_T 0.96 0.00
36_L 141_E 0.94 0.00
117_V 122_Q 0.94 0.00
26_E 56_E 0.93 0.00
98_I 77_E 0.91 0.00
50_A 179_V 0.91 0.00
167_I 36_Q 0.91 0.00
159_Y 222_L 0.90 0.00
79_Q 94_L 0.88 0.00
113_M 159_Q 0.88 0.00
130_H 72_A 0.87 0.00
192_A 127_L 0.86 0.00
23_Q 184_I 0.86 0.00
85_L 128_P 0.84 0.00
163_A 74_T 0.84 0.00
195_W 194_L 0.84 0.00
138_Q 152_G 0.83 0.00
149_L 100_P 0.83 0.00
173_P 224_V 0.82 0.00
146_L 62_G 0.82 0.00
187_S 243_H 0.82 0.00
56_I 152_G 0.82 0.00
197_L 231_R 0.81 0.00
154_E 125_V 0.80 0.00
34_R 221_R 0.80 0.00
115_I 59_I 0.80 0.00
25_I 251_F 0.79 0.00
189_I 184_I 0.79 0.00
168_S 36_Q 0.77 0.00
131_V 32_A 0.76 0.00
147_E 210_A 0.76 0.00
27_R 189_H 0.76 0.00
96_N 40_L 0.75 0.00
73_R 30_I 0.75 0.00
48_V 184_I 0.75 0.00
182_S 219_A 0.75 0.00
64_A 83_H 0.74 0.00
75_A 30_I 0.74 0.00
106_G 242_A 0.74 0.00
169_L 94_L 0.74 0.00
91_Q 30_I 0.73 0.00
17_P 251_F 0.73 0.00
170_A 215_N 0.73 0.00
189_I 226_A 0.73 0.00
147_E 94_L 0.73 0.00
131_V 56_E 0.73 0.00
204_E 215_N 0.72 0.00
199_T 238_R 0.72 0.00
189_I 92_N 0.72 0.00
183_I 77_E 0.72 0.00
130_H 40_L 0.72 0.00
172_A 241_F 0.72 0.00
18_V 24_Q 0.71 0.00
104_R 230_A 0.71 0.00
80_A 148_V 0.71 0.00
78_H 201_V 0.71 0.00
185_V 157_S 0.70 0.00
66_L 163_T 0.69 0.00
123_P 143_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.278 seconds.