May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
S07 - S17
UniProt: P17291 - Q5SHP7
Length: 261
Sequences: 1241
Seq/Len: 5.24
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeGQContact Map
3v2c3v2cGQ 3v2eGQContact Map
2uub2uubGQContact Map
2j002j00GQ 2j02GQContact Map
3t1y3t1yGQContact Map
4juw4juwGQContact Map
2uua2uuaGQContact Map
4b3m4b3mGQContact Map
2uxc2uxcGQContact Map
4kix4kiyGQ 4kj0GQ 4kj2GQ 4kj4GQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_K 71_F 0.79 0.00
43_F 25_R 0.76 0.00
33_D 16_Q 0.76 0.00
63_K 3_K 0.74 0.00
84_N 51_Y 0.74 0.00
128_A 51_Y 0.74 0.00
12_L 72_R 0.74 0.00
56_Q 22_L 0.73 0.00
131_K 25_R 0.71 0.00
58_P 44_A 0.71 0.00
156_W 37_K 0.70 0.00
2_A 1_M 0.70 0.00
77_S 35_V 0.70 0.00
135_V 52_K 0.69 0.00
111_R 69_K 0.68 0.00
4_R 3_K 0.68 0.00
108_A 16_Q 0.67 0.00
41_R 36_I 0.67 0.00
52_E 65_I 0.67 0.00
13_Q 35_V 0.67 0.00
125_M 11_V 0.66 0.00
43_F 42_Y 0.66 0.00
88_P 18_T 0.66 0.00
11_Q 40_K 0.65 0.00
84_N 35_V 0.65 0.00
142_E 15_M 0.65 0.00
32_R 40_K 0.65 0.00
114_R 63_R 0.64 0.00
122_H 40_K 0.63 0.00
149_R 60_I 0.63 0.00
148_N 4_K 0.63 0.00
100_A 42_Y 0.62 0.00
73_M 72_R 0.62 0.00
26_F 4_K 0.61 0.00
53_K 81_R 0.61 0.00
81_G 61_E 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.4139 seconds.