May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLGC - FLGE
UniProt: P0ABX2 - P75937
Length: 536
Sequences: 449
Seq/Len: 0.84
I_Prob: 0.04

FLGC - Flagellar basal-body rod protein FlgC
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLGC
FLGE - Flagellar hook protein FlgE
Paralog alert: 0.21 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FLGE FLGF FLGG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_D 299_V 1.64 0.04
105_T 383_S 1.40 0.02
47_V 331_N 1.34 0.02
28_L 355_L 1.31 0.02
45_K 71_R 1.29 0.02
45_K 301_G 1.26 0.01
22_N 371_L 1.25 0.01
13_A 298_T 1.24 0.01
13_A 119_Y 1.23 0.01
61_G 19_V 1.22 0.01
86_D 341_V 1.19 0.01
112_Y 198_V 1.18 0.01
17_Q 301_G 1.17 0.01
21_L 316_L 1.17 0.01
129_T 371_L 1.16 0.01
118_V 185_T 1.15 0.01
114_A 368_S 1.15 0.01
9_I 290_S 1.15 0.01
104_N 117_T 1.15 0.01
113_Q 391_Q 1.14 0.01
86_D 235_T 1.14 0.01
132_L 200_F 1.13 0.01
78_Y 178_Y 1.12 0.01
82_N 216_S 1.12 0.01
18_S 303_Y 1.10 0.01
67_V 348_G 1.10 0.01
67_V 10_L 1.10 0.01
134_Q 6_A 1.08 0.01
28_L 294_N 1.07 0.01
14_L 143_L 1.07 0.01
82_N 231_N 1.06 0.01
78_Y 30_Y 1.06 0.01
18_S 371_L 1.06 0.01
129_T 386_Q 1.06 0.01
82_N 398_L 1.05 0.01
99_V 187_F 1.05 0.01
48_V 157_N 1.02 0.01
11_G 119_Y 1.02 0.01
77_V 395_L 1.01 0.01
24_A 17_L 1.01 0.01
11_G 394_I 1.01 0.01
125_M 386_Q 1.00 0.01
63_K 102_L 1.00 0.01
88_K 57_I 1.00 0.01
17_Q 117_T 0.99 0.01
73_P 140_P 0.99 0.01
84_L 299_V 0.99 0.01
68_I 32_F 0.99 0.01
12_S 339_S 0.98 0.01
9_I 235_T 0.98 0.01
12_S 363_S 0.98 0.01
106_M 231_N 0.98 0.01
9_I 349_T 0.98 0.01
31_A 137_I 0.97 0.01
70_S 395_L 0.97 0.01
12_S 25_A 0.97 0.01
18_S 200_F 0.97 0.01
112_Y 374_M 0.97 0.01
45_K 323_E 0.97 0.01
5_N 387_T 0.97 0.01
54_A 2_A 0.96 0.01
10_A 270_T 0.96 0.01
6_I 281_N 0.96 0.01
117_E 386_Q 0.96 0.01
87_A 271_G 0.95 0.01
113_Q 13_A 0.95 0.01
61_G 319_F 0.95 0.01
11_G 17_L 0.94 0.01
34_V 177_S 0.94 0.01
71_Q 357_N 0.94 0.01
39_G 401_L 0.94 0.01
104_N 386_Q 0.94 0.01
12_S 57_I 0.94 0.01
22_N 372_V 0.93 0.01
61_G 401_L 0.93 0.01
31_A 183_S 0.93 0.01
82_N 105_N 0.93 0.01
94_P 375_I 0.93 0.01
32_D 303_Y 0.92 0.01
18_S 1_M 0.92 0.01
14_L 351_N 0.92 0.01
82_N 132_A 0.92 0.01
41_P 389_K 0.91 0.01
93_M 374_M 0.91 0.01
47_V 194_H 0.91 0.01
15_T 154_M 0.91 0.01
2_A 396_N 0.91 0.01
10_A 147_K 0.89 0.01
92_K 80_N 0.89 0.01
132_L 12_A 0.89 0.01
127_L 56_G 0.89 0.01
103_V 38_S 0.89 0.01
63_K 374_M 0.89 0.01
41_P 401_L 0.89 0.01
39_G 20_I 0.89 0.01
33_S 313_Q 0.89 0.01
129_T 116_L 0.88 0.01
9_I 194_H 0.88 0.00
53_A 357_N 0.88 0.00
14_L 48_V 0.88 0.00
18_S 397_T 0.88 0.00
39_G 395_L 0.88 0.00
82_N 68_N 0.88 0.00
92_K 331_N 0.88 0.00
98_V 370_E 0.87 0.00
61_G 49_G 0.87 0.00
24_A 55_A 0.87 0.00
28_L 163_P 0.87 0.00
62_V 384_N 0.87 0.00
123_K 33_K 0.87 0.00
39_G 50_L 0.86 0.00
18_S 402_R 0.86 0.00
82_N 163_P 0.86 0.00
107_S 304_S 0.86 0.00
77_V 399_V 0.85 0.00
112_Y 386_Q 0.85 0.00
88_K 151_T 0.85 0.00
113_Q 368_S 0.85 0.00
125_M 139_I 0.85 0.00
91_V 112_Q 0.85 0.00
35_T 301_G 0.85 0.00
121_T 49_G 0.84 0.00
25_A 34_S 0.84 0.00
32_D 374_M 0.84 0.00
53_A 259_S 0.84 0.00
46_Q 386_Q 0.84 0.00
28_L 305_N 0.83 0.00
127_L 85_L 0.83 0.00
77_V 293_I 0.83 0.00
68_I 206_N 0.83 0.00
33_S 385_A 0.83 0.00
96_V 95_S 0.82 0.00
121_T 210_V 0.82 0.00
104_N 230_F 0.82 0.00
75_K 108_L 0.82 0.00
133_G 324_G 0.82 0.00
87_A 261_S 0.82 0.00
23_V 136_N 0.82 0.00
26_S 73_L 0.82 0.00
117_E 385_A 0.82 0.00
28_L 249_A 0.82 0.00
121_T 110_N 0.82 0.00
25_A 280_Q 0.82 0.00
109_S 319_F 0.82 0.00
13_A 324_G 0.82 0.00
129_T 397_T 0.82 0.00
67_V 225_A 0.82 0.00
123_K 299_V 0.82 0.00
34_V 61_F 0.82 0.00
133_G 382_Q 0.82 0.00
112_Y 117_T 0.81 0.00
7_F 329_G 0.81 0.00
62_V 109_V 0.81 0.00
117_E 371_L 0.80 0.00
91_V 381_Y 0.80 0.00
113_Q 394_I 0.80 0.00
105_T 159_N 0.80 0.00
28_L 358_G 0.80 0.00
5_N 10_L 0.80 0.00
127_L 351_N 0.80 0.00
119_L 6_A 0.80 0.00
97_D 6_A 0.80 0.00
47_V 374_M 0.80 0.00
86_D 374_M 0.79 0.00
26_S 372_V 0.79 0.00
75_K 303_Y 0.79 0.00
103_V 61_F 0.79 0.00
67_V 152_A 0.79 0.00
107_S 393_Q 0.79 0.00
97_D 271_G 0.79 0.00
119_L 200_F 0.79 0.00
119_L 71_R 0.78 0.00
94_P 291_Y 0.78 0.00
50_Q 18_D 0.78 0.00
118_V 333_W 0.78 0.00
114_A 50_L 0.78 0.00
28_L 242_A 0.78 0.00
122_V 6_A 0.78 0.00
23_V 389_K 0.78 0.00
32_D 57_I 0.78 0.00
47_V 97_N 0.78 0.00
78_Y 293_I 0.78 0.00
104_N 299_V 0.78 0.00
41_P 20_I 0.78 0.00
46_Q 117_T 0.78 0.00
26_S 199_Y 0.78 0.00
133_G 319_F 0.78 0.00
125_M 261_S 0.78 0.00
54_A 259_S 0.78 0.00
121_T 386_Q 0.78 0.00
13_A 373_N 0.78 0.00
123_K 161_S 0.78 0.00
94_P 22_N 0.77 0.00
39_G 331_N 0.77 0.00
67_V 84_R 0.77 0.00
84_L 371_L 0.77 0.00
132_L 277_A 0.77 0.00
120_N 388_I 0.77 0.00
33_S 78_S 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.9943 seconds.